EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-18734

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:41565260-41567210

Target genes

Number: 22
Name	Ensembl ID

Bag1	ENSMUSG00000028416
Ube2r2	ENSMUSG00000036241
SNORD121A	ENSMUSG00000089265
AL807823.1	ENSMUSG00000093562
Ubap2	ENSMUSG00000028433
Dcaf12	ENSMUSG00000028436
Ubap1	ENSMUSG00000028437
Kif24	ENSMUSG00000028438
Nudt2	ENSMUSG00000028443
AI464131	ENSMUSG00000046312
1110017D15Rik	ENSMUSG00000028441
1700066J24Rik	ENSMUSG00000036162
Gm12404	ENSMUSG00000087623
2310028H24Rik	ENSMUSG00000028439
Enho	ENSMUSG00000028445
Cntfr	ENSMUSG00000028444
Il11ra1	ENSMUSG00000073889
2810432D09Rik	ENSMUSG00000036114
Dctn3	ENSMUSG00000028447
Galt	ENSMUSG00000036073
Sigmar1	ENSMUSG00000036078
Ccl27a	ENSMUSG00000073888

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr4:41566367-41566385	GCTTGCCTCCTTCTTTCC	-	6.04
Myog	MA0500.1	chr4:41566616-41566627	GACAGCTGCTG	+	6.14
Nr5a2	MA0505.1	chr4:41567092-41567107	AAGTTCAAGGCCAGC	+	8.42
Tcf12	MA0521.1	chr4:41566616-41566627	GACAGCTGCTG	+	6.02
ZNF740	MA0753.2	chr4:41566539-41566552	GTGGGGGGGGCAT	-	6.62

Enhancer Sequence

CAGCCCTCCT CTGCGCACTA AACTCATTTC TGTGCTGTCC CTTGAACTTG CCCAGGCCAG 60
AGATGCACTC GTAAGAGTTT AAATCTTTCC CCATCATTTA CTTGTTGGCT TCACTAATTA 120
AGCAGTGTTA ATTTCATTTA CTGAAAATGG AAATTCATCC ACCTCATTTC TCCCTGTTCA 180
TCCTCCACAC ACAAAATCCA TCACTCCGTA GCTGCGGGCT GCGTAAAATT TACAGGACTA 240
ATTATGTTGT CAAGTCTCTT TGTAAATACA GTCCATAAAG GCCACTCTGC TTGCCGGGTG 300
GCATGCAAGG GCATTCCGTT GTTAGTTTAA TTACTGGTTA GTTATTTAGG TTCTCAAATG 360
TTTGCCTCAT TTTCCCTAAA TCAAATTAAA TGTCCTACTT GATGTGTTCT GTCTCCAAGG 420
CCTTGCTCGC TCTTACTTCC CACACTATTT AAATACAGCT CCCAACCTGA CAAGGGTGCC 480
GAGGAACCCG TGCTGAGAGC CTGAGCCAGC CTGGCGCTGA TGTCTCTGAC CATGCCCGAG 540
GTTTAGAACC TCCAGAATCA AGACTCTTTT CCGAGCCAGC TCTGGGCTGG TCCCCTGCCT 600
ATGGGAACTG TGGAAATCCC AACACAAGGG GGCATTTCTG TTCCTGGAGT ACAAGGTGGC 660
AGAGCCAGGG GTGGGAAAGA GAGAGGGGGT TTCTCTGTTG TGCCAGTGTG GCTATTCCCC 720
TGACTCCAGA ACTGCATCTG CATCTCCCCA GGAGAAAAAG CTCCATCGTT CTGAGTCCTA 780
AAATTAGAGT TTGGGCCTCC GTTCCCTGAA TGTCTCTGGC ATTTGCTTCC TGTTGCTGGA 840
GCAGCAAGCG ACCACAAACA CAATGGCTTA AATAACACAT TTTTTTCTGA GTTCTGGAGG 900
CCAGAATCTC AAGATGGATT ACACGGAGTT AAAATCAGGT GTCAGCAGGG CTGTGTTCCC 960
TCTGGACGTC CCCCAGGGAG CACCTGTTTC TTTTTCTGCT TCCAGCTCCT AGTGGCCGCC 1020
TGCATCCCAT GGCTTGTGGC CCTCTTCCAG CCAGCAACTG CATCATCCTG ACATCGGCTT 1080
CTGCCGTCAC ATCTGAGTCT CTGACTCGCT TGCCTCCTTC TTTCCCTTAT AAGAACTCTT 1140
ACGATTACAT CAAATCCACC CGGGTAATCC AAGATAATCT CCCCATCTCA AGGTCTTTAA 1200
CTTAATCACA TCTGCAAAGT CCCTTTTGCC ATACAAAGTG ACATATTTAT AGGCTCCAGG 1260
GATTAGGATG TGGACATTTG TGGGGGGGGC ATTAGTCTGC CTACTCCACA CCCCCCCTCC 1320
AAGTGCTTCT TGCATGACTT AATAAGGGAG TCATCAGACA GCTGCTGCCT TGGAACCAGT 1380
CCTAGGCTGG CCTCGTTTAG GATGCCACAG TACAGAGAAG CCTGCCAGCC AAGGCTGGCA 1440
TGGTATCTTT GTCTCTTCAG TTGGCATCTA CCTCCTACTG ACCACTGACC TGGCTTCAGC 1500
CTTGTGCCCC AACATGCCCT CCACTGCCTT GCTCTCTTTG AGTCCTGAGT AGTCCTGGGG 1560
CATCCAGAAT GCTCTACAGT GCCCACCCCT CATAACCGAG AACGGAACCA GGCAGGGTTG 1620
GCAGTTGTGG GCTTGAGGCC CCCAGTAACA AATTCCAGTT AAGAAGACAT TGATCTGACT 1680
TGCTCATTGG ATAGTATTCA GTCTGTCCTA GCAGAAGCTG AAGACAGTCA GAGCTTTGGT 1740
CTATGGTAGA ATTAAGACGT ACATGAAGCC ATACCTAGCT TCAGGAGACT GAAGTAGGAT 1800
TGCAGGTGCA TGGCCTGCCT GGGCTACAGA ATAAGTTCAA GGCCAGCCAG GGCAATTTAG 1860
TGAGATTCCT GCTTCAAAAG AAAAAATAGG AAGGATAGAT TCAATGGTAT AGTAACTACC 1920
TAGATTCAGT TCCCAATAAG AGTCAGTCTC 1950