EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-18560

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:11877600-11878550

Target genes

Number: 11
Name	Ensembl ID

Rad54b	ENSMUSG00000066307
Pdp1	ENSMUSG00000049225
1700123M08Rik	ENSMUSG00000085614
Gm17454	ENSMUSG00000090438
Gm10604	ENSMUSG00000073995
Gm11840	ENSMUSG00000085027
Gm11842	ENSMUSG00000085467
C430048L16Rik	ENSMUSG00000052137
Gm11839	ENSMUSG00000083246
Rbm12b	ENSMUSG00000046667
Fam92a	ENSMUSG00000028218

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PHOX2A	MA0713.1	chr4:11877857-11877868	TAATTGAATTA	-	6.14
Phox2b	MA0681.1	chr4:11877857-11877868	TAATTGAATTA	-	6.14

Enhancer Sequence

AAATGATTTC TAGGTTACGC TTTAAAAACA TGCAGGGTAA GAGAAAACAT CCCGACCTAG 60
AGGAAAGTTA AGAAGTTCAT TCCAGTAGGC ATTTTCTGTA ACAGGATTGG AAGCAAGCAC 120
TGGGAGAAAG TGCCAAAGGA TACAGTGTGT ATGGAGGGGC CCTGGCGCTT GAGTGCATGG 180
CGCTTCGTCT TCTGCATAGC ATCTGCTGAC TACAGCATGT TGAATCAGCA TCCTGACTGA 240
AAGTGGTAGG CAGCCATTAA TTGAATTACT GTTTTTTTCT TATCATGGAA AACTTCCTTT 300
TAGTTGTGAT CTTTGAAATC TGATCAATTT CCATTTTACT GAGATATAAA TCATCCTAGG 360
TGACTTTTTA GTTTTAGATA GAATCTTCCT GACATGGATT TTTAATTTGG CTTTCAAAAA 420
AAGGGGGGCG AATGAATGAA CTGATCATAC GTGGGTGAAC AAACAAATGA GCGCAGGGGC 480
AGCAATGGCA GGCAATCTAG GAAGTAGAGA AGGGACAATG GGGAAGCTGG AAGTGCTTGC 540
AGGTTCAGTA CACACTGCAG TGTTCTCTGT TTTCCCTTGT TACCAAGGAG ATGGTATGGA 600
CTGCAGTAAC CAGGCAACAG ATGATGCTCT CACATTCCAC CTTCCCTGCC CCATCTACAG 660
GGACAGGACT TGCAATGGAA ACCATCAAGG AAGACTTAAG CGTCTCTGAA TGTTACAGAA 720
CTCAAGAAAA AGAAGGAAAG GGTGACCTGC AGGAAGAGAC TGGTGTGAGG GTACCAGTGC 780
CTTCCAGTTA TTTCTACACA TGCCGTATGT ATGTGCAGAA ATAATTGAAA AATACCTTAC 840
ACAGCATGAC AACCCTCACA TAGGATTTTA TAAGGGTTCA GATGATCACA TTTCAACAGA 900
GTAACTCATG AGAAATGTTG TCTGACACCT ATAGTTGTCA CAAGATACCA 950