EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-17851

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr3:96235320-96236680

Target genes

Number: 10
Name	Ensembl ID

SNORA19	ENSMUSG00000084686
Hist2h2be	ENSMUSG00000068854
Hist2h3c1	ENSMUSG00000093769
Telomerase	ENSMUSG00000064796
Txnip	ENSMUSG00000038393
Gm16253	ENSMUSG00000087610
Polr3gl	ENSMUSG00000028104
Lix1l	ENSMUSG00000049288
Rbm8a	ENSMUSG00000038374
Itga10	ENSMUSG00000090210

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

LMX1B	MA0703.2	chr3:96235400-96235411	TTAATTAAAAT	-	6.62
Nr5a2	MA0505.1	chr3:96236061-96236076	GGTGGCCTTGAGCCC	-	6.07

Enhancer Sequence

ACTTCTTCAC AAGCAGCCAT TGGTGGATTA GCTGGGCCAC AGCCTGTAAG CCATCCTAAT 60
AAATCCCATT ACATATACAG TTAATTAAAA TTAATCTTTC TTAAAAAACC AGCACGCCTG 120
GTTAGAACAT GCTCCTTGAG TGAAGCTCTT TGAGAAGAAT TCTGAGTGTT TGTGAGACAA 180
CTCCAAGAAG ACAGGACAGC TGTCTTGTGA TCTCTGTCCT CCAAAGCAAG GGATTGCTCT 240
TGGAGCGTGC TTTGGGGTCC CTCGCAGTTG TAGTAGACAG GAGTGTGTTT GCTTCAGATC 300
ATCTTTGCCG TTTGCTGTCA CTGCTCTGCC ACCTGTGGCT TGGCCTTGTG ATTGTATACA 360
GCTTGAACTC ATGAGAAATT TGTTCATGTG GCCTTGTTTC ACCCTCAGAA TATAAACTGT 420
CAGATTCTCT AAATAAAGTT AGTTGTTGCA TGAGACTTTA GTCCTCGTCA TTTTAAGGCT 480
CCATTCTCCC AGGTCCCACA GGGCTCTAGA GAGGTAACTG TGATACCAAA ACAGGAGCCA 540
CACTGTCCCA CATTGTTACT AAGTCCCAAT TCCTTATTAG AATAAGTGCT GTTTCCTAAG 600
CCTAATGTTT TTCAACCTAC CCTGAACTTG TACCCCCATG ATGTTTGCCC ACCCCTTTGT 660
CTTACTAACG TATGATTTCT CCTTTGCTTT AGGAAGTTGC TCCTCTTCCA CATGATGAAT 720
TCTTGCAGTA TCTACCCCAC AGGTGGCCTT GAGCCCCAGG TCCCCCACTC TTTTGTCCAG 780
AGCCAACAGT TAATTATATC TCAACAGTTG TTTTCTATCA ACCCCAACCC TTGCCCATAA 840
AAGGGACCCA AACACCAGTG AGGAGCTGCT CTTTGAATCC CGACTTAGTG TGGGGCAGGC 900
AGTCATCTGG CCAGTCCCTT GTGCATCAGT CATGGGGTGT TTGTTTCCTC AGTTCTATGA 960
ATGTGAAATG TCTCCCTGAG GCTAAAGGTC GGAATCATTG GTTCCCAGCT GGTGACACTG 1020
AAAGGGACTC CAAGACTAAG CACTCAGCAC AAAGGAGATT TATTTGCCCC AGAGAGACAA 1080
AGGGCAGGGA ACAAGAGACA AAGACAGGAG ACTGGAGGAT TATCGAGAAG GGAAGGGAAC 1140
AAGGGAGAGG GGAAAGAGGT ATTTGTCCTA GAGGGACAAA AGATAGGCTG TCTGGATAGA 1200
GAGGAGACAG ATGTGCCCAT GGTAAATGGC ACTATTTATA AAGGGAGAAA GGGAAAGCCT 1260
GGGCTAGGGT GAAGTGTTTA ATTTTGATTG GCGATAGGTT AATTAGGGTG GCCAAAAGGG 1320
GTTTACACAA GTAACCTCTG CATTTGGGAA GCAGAGGTCA 1360