EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-17647

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr3:87733080-87733770

Target genes

Number: 20
Name	Ensembl ID

4933430H15Rik	ENSMUSG00000023084
Prcc	ENSMUSG00000004895
Hdgf	ENSMUSG00000004897
Mrpl24	ENSMUSG00000019710
Isg20l2	ENSMUSG00000048039
Rrnad1	ENSMUSG00000004896
Crabp2	ENSMUSG00000004885
Nes	ENSMUSG00000004891
Bcan	ENSMUSG00000004892
Hapln2	ENSMUSG00000004894
Gpatch4	ENSMUSG00000028069
Apoa1bp	ENSMUSG00000028070
Iqgap3	ENSMUSG00000028068
Gm3764	ENSMUSG00000091070
Mir3093	ENSMUSG00000092988
AC044864.1	ENSMUSG00000092876
Cct3	ENSMUSG00000001416
0610031J06Rik	ENSMUSG00000001418
Smg5	ENSMUSG00000001415
Ubqln4	ENSMUSG00000008604

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr3:87733192-87733212	TGTGTGGGGGGGAGTTGGGG	-	6.3
RREB1	MA0073.1	chr3:87733194-87733214	TGTGGGGGGGAGTTGGGGGG	-	6.47
SREBF1	MA0595.1	chr3:87733154-87733164	ATCACCCCAC	+	6.02

Enhancer Sequence

ATACTTTTAT AGTTGGAGAT CACAACATGA GGAACTGTAC TAAATGGATG GATGTAGGAT 60
CACGAAGGTT GAGAATCACC CCACCCACAA GCCTTGCTGG TGCTCTTCTG TGTGTGTGGG 120
GGGGAGTTGG GGGGAAATGA GACATGTCTC AACACTCGTT AAGCTGGCTG CAAGTCAAGA 180
CAATTCTGCC TTAGTCTTCT GAGGGGCGAG ATTACAGAAA GGTAACTTTA TGTATGTCTG 240
CCCTGTTTTG TTTCCCTCCC CTCCTTTTTT AAAGTAACAT CGTCCAGTCC AGGCTGCCCT 300
AGAACTTGTT TTGTAGCCCA GGGGAACCTT TTACTCCCGA TTCTCCTGCA TCTACTTCTT 360
AGGTGACAGG ATTACAAGGG TACACCACAT TTGGCCAAGC ACTTCCTCTT CCCCAACCCA 420
CTCTTTATTG CCTTTAGTGG AGGATATCCT ATGGAACATC TCGTTTCTCG TATGTTTCTA 480
TGCAACTGTA GCATGGCCAA ATGTTGGTTG TGGGGTTTCA AATGAAACAA ACAAAACTTA 540
AGTATTAGAG TCAGAAGGCT GGGTGAAAAG TATTCTAGTA GTCAACGCGT TCCTTATTAG 600
GAAGAGATAA AAGCTGTCTC CACATTTTCT CTGCAGTGGG CTCCTATTCA CCCCCCGCCC 660
CCCAAGAAGC ACCCCGCCCT CAGCCCGGTG 690