EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-16047

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr2:121121270-121123160

Target genes

Number: 21
Name	Ensembl ID

U3	ENSMUSG00000065883
Ccndbp1	ENSMUSG00000023572
Adal	ENSMUSG00000027259
Lcmt2	ENSMUSG00000074890
Tubgcp4	ENSMUSG00000027263
Zscan29	ENSMUSG00000050619
Trp53bp1	ENSMUSG00000043909
Mtap1a	ENSMUSG00000027254
Ppip5k1	ENSMUSG00000033526
Ckmt1	ENSMUSG00000000308
Gm14000	ENSMUSG00000084140
Pdia3	ENSMUSG00000027248
Catsper2	ENSMUSG00000033486
Ell3	ENSMUSG00000027246
Serf2	ENSMUSG00000074884
2310003F16Rik	ENSMUSG00000027245
Serinc4	ENSMUSG00000046110
Mfap1b	ENSMUSG00000048222
Gm14018	ENSMUSG00000084407
Mfap1a	ENSMUSG00000068479
Wdr76	ENSMUSG00000027242

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6	MA0677.1	chr2:121122522-121122536	GGGGTCAAAGGTCT	+	6.18
RXRB	MA0855.1	chr2:121122522-121122536	GGGGTCAAAGGTCT	+	6.45
RXRG	MA0856.1	chr2:121122522-121122536	GGGGTCAAAGGTCT	+	6.2
Rxra	MA0512.2	chr2:121122522-121122536	GGGGTCAAAGGTCT	+	6.24

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_04350

chr2:121119852-121124151

Cortex

Enhancer Sequence

ACCCCAGGGT AAGAGCCTAA CCAAAGGGCA CGGCAAGGCA GAAGGATTAG GGGATGCTGT 60
GGTAGATAAG GAGCTGGGAT GGGGTATCTG GTACCTTGTA AATCTGATGC ATCTGGACCT 120
GGGCTAGCCT GGTAGGAAGG CAGCCTGGGA TGGAGGGAGA GAGGAGGTGA ACATTACTGA 180
CTTGGGGTTC AGCCTGGATC CACAGCCAGT GGAACCAACA GGGGCTGTGA CAGTCCACCT 240
CTGTACTAGG TGGGGGTGGG GACCATCAGC TGAGAGGCAG CAATAGAGGG TGGTGCCACC 300
GGTTTTGCCT GGCAGCCAGG GCACAGGAGG AATTTGGGGG CTGTGTCTTT AAGGGAAAAC 360
AGAAGAAGCT GAGAGGAAGG GGGAATTTAC CTACTGGGAG GGTCCTTGGG TTATCAGCTA 420
CTAGATTGTT CAGCTGCTCC CTATTCTGGG GTGAGTGTGG CAGCGAGTTT TTGCCAAGTA 480
AGGGAAGGGG GTGACACTCT GGAAGAGAAC GGAGGAATGG GTCACTGAGA CGTGGCATGT 540
GCCTCCGTAT AGGCTAACTG GTTTGGTTTT GGCTCCCCGC ACCCCATTCC CTGTGGCCAG 600
CTTGAGCCTG GGGCTTTAAG CCCCCCTCTG TGGCCTCTCT GAGGCAACTC AGGAGCTTGA 660
GAGCCCTGGC TCTTCAGCAG CTGCCCTGCA TTCTCCGTCC TGTCAACCCC ACGGGTTCCC 720
TGCCTCGGCC CCACCCTCAC CTCATCTGTG CTTTCCTTCC CAAGATGGGG GCTCTTCCAA 780
CAGAAGCCAG TTTCTTCTCC TGCTCTGCAT GCACCCCCAT CCCTACCCCC CACCCCCCAT 840
GCAGAGGCAG CCAAGAAAAT GACTTGTCAT GCTGGGGTGG GGGGTGGGGG CGGAGCTGGA 900
GCTGGAGGCT GAGCTTAGCG CGCACACACA CACACACACA CTCACACACT GCGGCAGACT 960
GCAGCTGCCT GAGCACCCCC CCCCCCGCCT CACTGCAGAG ACACCTGCCC TCCTGCCCAC 1020
TCAGCTTCAC ACCCGAAGCC CACCCCCAAC CACAGCACTG GCTGTGGGAA GCGCCCCAAT 1080
CTCTTAAGAT AGTCTTCTGC AAAGATAAAG GGGAAAAAAA ACCCGGCAAT TCCCTTCATT 1140
GGAAGAGCTG GGGGGCAGAA GAGAGAAACC AGGCTTCTCC CAGGATAAGG AGCGATGTAA 1200
TGGACTAGCT CCCCAGGAGT GGGGCTGGGG GTCCTGTGTC AGGCCAGGAA GTGGGGTCAA 1260
AGGTCTTGTG AGGATACACT GGGGACCGTG AAGCTGCTGG AGTAGGGAGA TGGTAGCTGG 1320
AGAGGACGTG TCTTTCTGTT CTACCTAGAT TGAAGTGTGA CCTTGTTTGT GATGGGGGAG 1380
TCCTGGCTCT TCTAAGTCTG ACTTAAGACT GGCAGAGGAT GGAGATAGCC CAGGCTGCGT 1440
AAGCCCTGCT CCTGCCTGCC TGTGCCAAAG TGTCCCTCCA CTCCCAAGTT CACAGAAGAG 1500
GACCCAACAG GCCCTGCATA GGATTTGGGT CTCTGACACC TTCATCTTCC CCATAGTTGC 1560
ATCTGCTGCC TGCTCCTTGG CATCAAGGCT CTTCCTCTAA ACAAAGGCCC TGGCCCCAGT 1620
CACCCTTGTC CCAGCCTCAG AAAAGAAAAG GGAGTTGGAG TCGCCGAAGA GGGCTCCAGG 1680
GAACGGACTC TGAGCCTCCC CTCCCCAGTA TCCTCCAGCT GCCCCTAAGG TTAACCCTAC 1740
GGTGACTGCT ACTGTGCTGG AAGAGGAGGC AGATGGGAAG GCAGGAACCT GGGAAGTCGG 1800
GTCCATCCTT CTTAGCCTCT TTCTCACCCA CTGTGTTCTT TACTTTCACT GCTTAGTGTT 1860
TTATGTGGGT CTGGAGAAAG CCCTGGGGAG 1890