EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-15569

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr2:83568180-83570800

Target genes

Number: 4
Name	Ensembl ID

Zc3h15	ENSMUSG00000027091
Itgav	ENSMUSG00000027087
Dnmt3l	ENSMUSG00000081801
Fam171b	ENSMUSG00000048388

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr2:83570699-83570711	GTTTGTTTGTTT	+	6.32
SPIC	MA0687.1	chr2:83570763-83570777	TTCTTCCTCTTTCT	-	6.42
ZNF263	MA0528.1	chr2:83570761-83570782	TCTTCTTCCTCTTTCTTCTCT	-	6.08
ZNF263	MA0528.1	chr2:83570758-83570779	TCCTCTTCTTCCTCTTTCTTC	-	6.48
ZNF263	MA0528.1	chr2:83570749-83570770	TCTTCCTCTTCCTCTTCTTCC	-	6.66
ZNF263	MA0528.1	chr2:83570779-83570800	TCTTCTTCCTCCTGCTTCTCC	-	6.98
ZNF263	MA0528.1	chr2:83570755-83570776	TCTTCCTCTTCTTCCTCTTTC	-	7.1
ZNF263	MA0528.1	chr2:83570776-83570797	TTCTCTTCTTCCTCCTGCTTC	-	7.36
ZNF263	MA0528.1	chr2:83570770-83570791	TCTTTCTTCTCTTCTTCCTCC	-	7.64
ZNF263	MA0528.1	chr2:83570752-83570773	TCCTCTTCCTCTTCTTCCTCT	-	7.74

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_09734	chr2:83568009-83570204	MEF
mSE_11788	chr2:83568066-83569983	Placenta

Enhancer Sequence

CCCCTCTTTT TTCTTATAAT AGAAGATTAT GAGTGAGAAT ATCATCTTCA TATTGTTATG 60
GAAATGAATG CATCAGTACT CACTAAAAAG AAGTGTTAAG CAAAGCTTCC AGAATGGAGC 120
CGGGCATTGT GGTAGAAAAT GCTTAGAAAA TGCATCTGTA ATCTTAGCAC TTGAGAGATG 180
GAGGTAGGAG GATCAGGAGT TCAAGCCCCA CTTATGTCCT GTGTTCCAGG CCTGCTGGGG 240
TAACATGATA CCTTTTCTCA GAACAGAAAA GGCCCTAGTT TCAAGTTCTT TATCTCCATT 300
AGGAACAATA TTGCAATAGC TGTGGGCCAG TTAGCCCGAA TTAGCCGTGT TAACTCAGCT 360
AAAAATGAAT TCTATTTGCA TCAGGAGATG TTGGTTGCAC CTCCACTTCT ATTAATGGAA 420
CCCTCCTTTC TCTGTTGCCC TGGAGATCAT TTCATATTCC TCCCTCTGAT TTTCTATTTT 480
ACTTTGCCTC TCCTGCTACA CTCCTCTGAG ATTAGTCACT GCTTAGTCAC CAGGCAGAAG 540
GACTTACAAT CTCTTCCTTG ATAATGCTTC CTTGCTGCTA GCTCGCTTTC TGCTTCTGCT 600
TCTCACTTGA GCCTGGCTCT GGGCGGCTCA GAGCTTCTTG AATCATTCTG CCTATTTGGC 660
TGATAGACCT GCAAAACATG TTATATGTTT CTACTGCTTT TATATTTCCA AAACTTTTTT 720
TTTTCAGTAG TTCCATTGGC AGAGGAAATC CAAACCCAGA TTAAGGCCTC CTGAAGGAAA 780
ATTTTCAAAT TTCCATGTCA CAATACCTTA GAAAATGACT CAAAGTAGTG TACTTACCTG 840
AAGTCCCAGC ACCCAGAATG CTGAGGCAGG AGAGGATTGT CACAAGTTTG AGGCCAGCCT 900
GGGCTAGGTA GTGAGTTCCA GGATGGCTAG CTTTGGCTAC AGAGTGAGAC CTGGTCTCAA 960
AAACGCACAC CCACCCCCCA AAAAGAAAAA AAAGTGCATG TTTTAATAAA CTTGAATGTA 1020
CTGTGTTGGT TAATTTTCTC CATCATAAAT AATACATCTG GTTAAACTAC AGTCTTTATT 1080
ATTTGGAAAG CAAACCTTAG GTCTATTCCT TTCGGTTAAG ATCATAGATT TATTGGGTGG 1140
ATGTGATGGT TGGTGGATAC CTTAATTCCC AGGCCTCGGG ATGCAGAGGC AGGGCAATGC 1200
CTGTGAGTTC CAGGGCCGTG CATGAAATGT GGTAGTTACT GTCTCCGTTT TACTTTACAT 1260
AGTTGTTGAC CCAAAGCATT TGTTTGTTTG TAGAGAAAAT CTGAAACTTG AATTACACCT 1320
CAACTATTTT ATACACATTT CCTTTTATGT ATATAAATAG TGTTTTTTTT TTCAGGAGTT 1380
CCCATTGGAC ACCTCAGAGT CAGCTACGTA TATGAAACAA GCTTTATCTC GGAAAGGCCA 1440
GTGCTGAGAG CAGCCAAAGA GCTTAGTTCA TTTGGAAAGT TTGGAAGTGT ACTTGTCATT 1500
GTTTGGCCAG CTGCCCTGCT TGGTAGCCAG ACTTGTATTC TGTGAAGCAA CTGCCCTTCC 1560
TCTTCTGCAC TGGGTAGGAA GTGCAGCTCA GGGCCATCCT CACAGCGTGT CTCTTTCCCC 1620
TCTTTCTCTT CCCACCCCCA CCCAAACTGC TTTCTCCTTC CCATCTCTTG CCTTCCGCTC 1680
CTCTCGCTCC TCTCTCTCTC TTTCTCTCTA TCTCTTCCTT TCTTTTCCTG CTGCTTCTTA 1740
GCATCTCCCC CCATTCCTTG GCATCGCATG AATAGCACAC TCATTTCTGG AGTCCTAAAG 1800
AGGCATTAGT ACAAATAAAT CGAGTTACCA TCGAGTGCTG GTGTAGGTGT GGCTCTTGGT 1860
CATGTTTTTG GGCGTACTTT TTTTTGGAGT GAGATAGAGA CAGCAAGGAG AGCACCGAAG 1920
GCATGTTGGA TCTTACGTTG CTTAGCTTCA AAAATATACA CATTCTTCCG TGAGGTCTTT 1980
CCAGCCCCGT GCGAGCTTAA GGTAGCTCCC CACCTGTCGG CTTTGCCAGG AAACGGTATG 2040
AGCCAGCTTT CCTGCCCTTC GCTTTTCCCT CTTCTCCTTT GAGTTAGTTA CTTGAGCACT 2100
AATGGCTCTG TGGAAAGAAA AGCTCCTTTA AAAGCAGACT TTAAATTACT TCCTATTTCA 2160
TTAGGAAATA GTTTATTAAG TATATCAACT GCTGGTTTGA TTGCTAACGT ATTGTTTTCA 2220
TTTATCGACT GGCCACCTGG GAAAGAATTT AAGTAACGAC AGAGCGTTGT ACCTCTGTTC 2280
TGGAGACCTG AGAACGGAGA TTTCAAGTGA CTCCTCTTGA CTGCTTGCCT TGTTTGTGAG 2340
TTGACCCCTT CTGTTTGCAC TGGGTGGTGC TGCTTGTTAC ACTGCAAACA ACTTTTCTAT 2400
TCTGTCTCCT CTTTTCTTAT ACCTGGACTT CTGCAGGCAA TCAGCAGACA GTTTTAGTTG 2460
ACTTTTAAGT AACACTACTT GCTTTTTATA AAGTGTTTCA TTGATGGGCT TACAGGTTGG 2520
TTTGTTTGTT TTTTTTTTTT GTAGCATAAA TAACTTTTGT CTTAATTATT CTTCCTCTTC 2580
CTCTTCTTCC TCTTTCTTCT CTTCTTCCTC CTGCTTCTCC 2620