EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-15051

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr2:32056530-32058390

Target genes

Number: 22
Name	Ensembl ID

Lamc3	ENSMUSG00000026840
Aif1l	ENSMUSG00000001864
Nup214	ENSMUSG00000001855
Gm16534	ENSMUSG00000090157
Fam78a	ENSMUSG00000050592
Ppapdc3	ENSMUSG00000051373
Prrc2b	ENSMUSG00000039262
Gm13610	ENSMUSG00000086216
Pomt1	ENSMUSG00000039254
Uck1	ENSMUSG00000002550
Gm13611	ENSMUSG00000066068
Golga2	ENSMUSG00000002546
Swi5	ENSMUSG00000044627
Dnm1	ENSMUSG00000026825
1110008P14Rik	ENSMUSG00000039195
Ptges2	ENSMUSG00000026820
Naif1	ENSMUSG00000039164
Slc25a25	ENSMUSG00000026819
Fam102a	ENSMUSG00000039157
Dpm2	ENSMUSG00000026810
AL772271.2	ENSMUSG00000093277
Stxbp1	ENSMUSG00000026797

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr2:32056938-32056958	CCCCCACACACACACACCCA	+	7.19
ZNF263	MA0528.1	chr2:32056619-32056640	TCCCTCTGTCCCTCCTTCCCC	-	6.02
ZNF263	MA0528.1	chr2:32058291-32058312	CCCTCAGCCCCTCCTTCCTCC	-	6.67
ZNF263	MA0528.1	chr2:32056616-32056637	CTCTCCCTCTGTCCCTCCTTC	-	6.96

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_03726

chr2:32054405-32058787

Cerebellum

Enhancer Sequence

ACTACCAGGT ACTGTGGCCC GGGGTCTGTG CCTGGCTGTT TAGTGGCAGC CCTGGTATAT 60
ACATGGGCGC TTAGCAAATG CACGCACTCT CCCTCTGTCC CTCCTTCCCC CAACCCCCGT 120
GCACATTCGC ACAGACTCGA GCACTTTGGG AAGTTGGTTT TCTTCTTCTG CCTTCATGTG 180
GTTTCCAGGG ATCAGACTCA TCGTCGGGCT TTAAGACAAA TGCCCTGCTT CCTGCTCTGA 240
GGGCCTGGCC CTCTTACTTG AAACAGAATT CTGTATGAAG ACTGGCTGGG CATGGCCTTT 300
AGTCCCAGTA CTCAGGAGGC AGAGGAAGGT GGATCTCTGA GTTCAAGACC AGCCAAGTTC 360
CAGGCCAGCC AAGAATACAC AATGAAACCC TGTCGTTGCC GCCCCCCGCC CCCACACACA 420
CACACCCACA CACACATACA CAAAATCACA AAGTCTGTTT TCCTGGCTGA CCAAAGAGTA 480
CGCCACCTAC CTACTCTAAC TGCAGGCCAT GCGAGTGTCT TCTTCCTGCT TTTTGTTTTG 540
TTTTGTTTTT TGTTTTTTTG TTTTTAAGAC CTAGCATCAA ACCTGATCAC GTTTGTTGCT 600
GCTTCACTGG GATGCATACA CTGGGCCGTG ATCCTGCTGA AGCCCTTTAT GCATGATGTC 660
GCCTGTGAAT CACTTGGCAC TTTGCCCATT CCACAGCCTT TCACAGACTC TTCAGCCTGG 720
ATGCTTTGGA AGAGGGCAGG CCCCTCTGGC TGGCTCAGTC TGTAGCTTGC TCATGGTGAG 780
GTCCATGGTT TCTGTCTTGG ACGAGATTGA CTGGGCTGTT TTCTGGATTC CTCCTGGCTC 840
TGGTGACTGG CACGTTGGCC TCATGGTGAC TGCGATCTTG CCACGGCTCA CACTGGACAG 900
ACAGTCTGTG ATTGAGAGAA GTGTGGGGAG AGTGTTGAGG CGGGCTAGCC TATTATATTT 960
AAACTGCACA CGTCTATATG TATGGAGTAA GTGTGTAGAG GTCAGAGGAC AGCTTCGTGG 1020
AGTCAGTTCT TCTTCTCAGC CACCTTTATC GGAGTCTGGG GGCTGAATTC GGATTGCCAG 1080
GCTTGGCAGC AAGCACCTTT ACCTGCTGAG CCCTCTCACT GGCCCTGTTC GTCATACTTT 1140
GAGTTCACTC ATTCATTTCA GCAGTTGGTA ATCTCTCATT GTCTGCCATG AGGATGAAGT 1200
TATCTTTGAT TTTACTCCCC TAGCTCAGGT CCTTCGCAGT CTGACTTTGA GCTCTTCCTT 1260
GCTGTCTGAG GGAAACTCCT CCACAGCTCT CTGCTGTTGG GTCAGGGTTT CTAAGAACTC 1320
TGGATCCTTT GAGTGCTGGG TGGTGTTTAG AATACTCGTT ACTATTGGGT GTCGCTGCTC 1380
CTGGGCCTTC TCATCTGGGA GGAGGGGGCG GCGGGCGCAC AGGCGTCTGA CTGTTCAGTC 1440
TCCATTCCTG TCTGTGTTGA AAACCCAAAA AGTAGAGGGA GGGATGTCTC CAGTTCTGAG 1500
GAATGTGATT CAGTTCTTTC TCACTATGTT GTACGTGTGT GTGTGTGTGT GTGTGTGCGC 1560
GCACGGGAGC TCAGGTCCAC TGTGTACCTG TGGAAGCCAG TGACCAGCTT TGGTGTCCAT 1620
CTCTGCTCTC CGAGCTGTTT AAGACGGGGT GTTTGTTGTT TTTCTGATGG GTATGGCAGG 1680
CTGGCAGGCC TAGAACACGG GCTACAGACA CTCACGCTGT GCCTCTGGCT TTGACGTGGA 1740
TTCATGATTG TACAGTTAGG GCCCTCAGCC CCTCCTTCCT CCAGCAGCAA CCATGTTGTC 1800
CTGACACTGG TGCTTCCTTG GTTGATGCTG TGTGTGAATA GTTCAGTCCC CACGTCGCAC 1860