EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-14956

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr2:29733650-29736130

Target genes

Number: 27
Name	Ensembl ID

Rapgef1	ENSMUSG00000039844
Gm9823	ENSMUSG00000048316
Gm13420	ENSMUSG00000079497
Gm13547	ENSMUSG00000075425
Coq4	ENSMUSG00000026798
Trub2	ENSMUSG00000039826
Slc27a4	ENSMUSG00000059316
Urm1	ENSMUSG00000069020
Cercam	ENSMUSG00000039787
2600006K01Rik	ENSMUSG00000039798
Odf2	ENSMUSG00000026790
U6	ENSMUSG00000088348
Gle1	ENSMUSG00000019715
Spna2	ENSMUSG00000057738
Wdr34	ENSMUSG00000039715
Set	ENSMUSG00000054766
Pkn3	ENSMUSG00000026785
Zdhhc12	ENSMUSG00000015335
Zer1	ENSMUSG00000039686
Tbc1d13	ENSMUSG00000039678
Endog	ENSMUSG00000015337
D2Wsu81e	ENSMUSG00000039660
Ccbl1	ENSMUSG00000039648
1700084E18Rik	ENSMUSG00000052222
Dolk	ENSMUSG00000075419
Nup188	ENSMUSG00000052533
Sh3glb2	ENSMUSG00000026860

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL2	MA0478.1	chr2:29735728-29735739	GGATGACTCAG	+	6.32
JUN(var.2)	MA0489.1	chr2:29735725-29735739	AGGGGATGACTCAG	+	6.39
JUNB	MA0490.1	chr2:29735728-29735739	GGATGACTCAG	+	6.14
Nr2f6(var.2)	MA0728.1	chr2:29734307-29734322	TGAACTCCTGACCTT	-	6.04
ONECUT3	MA0757.1	chr2:29734201-29734215	TTTATTGATTATAT	-	6.03
Rarb	MA0857.1	chr2:29734307-29734323	TGAACTCCTGACCTTC	-	6

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_12612

chr2:29735489-29736778

Testis

Enhancer Sequence

GAAGAGGTGA GGATGCCTGC CCTCTGGACC ATGCCCTTCA GGGATGCCCG AGAGGCTGGT 60
TGCCTTAGTC ACTTGGTTGC CTGGCATGCA GATGATTGCA TGAGTGAGTC GTGAGGCTGC 120
CATGGTTACC ATTCAGCACT GAGTGGTGGG GACATTTATC CCACTGTCTC TATTCCCCAG 180
AGGGGATTCT CCCTTAGTAA CACAGAGTCA AGGAAACTGT GTCCGTCTCA TTCTTGTAAG 240
AGAGAGTTCC CATGAGTGGG GAGATGGCCC AGTGGTAACA TGCTGTCCAG GGAAGCGTGA 300
AGACCTGAAT ACAGGGTTAA GAGCCCACCA AAAGCTGTGT ACAGTAGGTC ACATCTGTAA 360
CCCCAGTGTT GGGGGACAGA GCCTGTGGGT TTGCCTGGCA AGCCAGTCAA GATGAAGTGA 420
AAGGTCACAG TTCAGTGAGT AACCCTGCCT CAGAAATAAG ATCTGAGACC CCTCTGCAGC 480
TCACCCAGCA TGCCTTCCTT CTCTCTAAAA ACCACATTCT CTTTTTTTTT TTTTTTTTTT 540
TTAAAGATTT ATTTATTGAT TATATGTAAG TACACTGTAG CTGTCTTCAG ACACTCCAGA 600
AGAGGGAGTC AGATCTTGTT ACGGATGGTT GTGAGCCACC ATGTGGTTGC TGGGATTTGA 660
ACTCCTGACC TTCGGAAGAG CAGTCGGGTG CTCTTACCCA CTGAGCCATC TCACCAGCCC 720
CAAACCACAT TCTCTTAACC CTCGTGATTT ATTTTTAGTT TCTGTGTATG GGTGTTTAGC 780
CTGCATGCCT GCCTGTACAC CTCAAGTATA CAGTGCCCTT GGAGAGTTAC TCATGGTTGT 840
GAGCTGCCCT GTGGGTCCTG GGAATCAAAC CTGCATCCTC TAAGAGCATC ACGTGCTCTT 900
AACCGCTGAG TTAGCCCTCC AGGTCCTTAG AAATATATTT AAAAATATAT TTAACAAACT 960
CCAACTCTGC TTCATTGAGG GGGGGGGTGG GAAGAGTGAG ATGAGCCTGG TGGCTCACAC 1020
ATTTAATCCC AGTGCTCAGG AGGTAGAGGC AGGTGGATCT TTGTGAATTC GAGGCCAGCC 1080
TGGTCTAGAG ATTGAGTTTG GGACAGCCAG GGCTACACAG AGAAACCCCG TCCAAAAAAA 1140
TAAAACAAAG CTAAAGGAAA GCAGTAGAGA AAGAGACCCC GACACTGACC TCTGGACTCC 1200
AGATGTAAGT ATATGTACAC AGTAAAGGAA GGTGACACAG TTCACAAGAG GGACCCAAGG 1260
CTGCACTTTG TGTGTGGGTG GGAGGGGCGC TGGAGGGGAA GGTGGTTCTT ACATATGTAC 1320
TAGTTTGTCC GTGCCTGGGG TCAGATGGAC AGTGAACCTT CCAGACAGAA GAAAACGGGT 1380
GTGTCAGAAG TGGAAAGCGG GAGGCCCTGG GGCACTCAGT CTCAGTCCCT GGCTAGGGCA 1440
CTACTAGAGA ACCGGAGGGC ACTGGGTGCC CAAGGGTGCC CCTGCTACTG TAAGACCCCC 1500
GAAGCTGGGC CTCCGCTCAA GTCCCGGGAT GAGCTGGCCA GCACCCCAGT GTCCCGATAG 1560
AAAACCACAC CTGATGCAAA CTGCAAGAGG TTTTATTATC AGCTAGCTGA GGACGAAGTC 1620
CCTCCGCCAT GCAGGGCAGG GGAGTTCGAC CCCCAAGCGG TGACAGTAGG GGGCTTTTAA 1680
CAGCTAGCTG AAGAGTTGAA AGAGTTGGGA GGAGTTGGAA AGAGTTCTTC TCTTCCGGGT 1740
GTCCTTGGTG AAATTTACAA GGCAGGAGTG GGGAGTGAGT TCTTTCTGAA TTTTTATCTC 1800
TGTGTCCTCG GCACAGGAAG GCAGGCATCT CTGGTTGTAA AGTATAGGAA AAAAAAAAAG 1860
GTTTTTTGCT GGCTATAGAG AACAAAGAGC TTCTTTCTGG CTGCATTTTT AGAGATCAGG 1920
GAAAACAAGC TTGGGGACCA TCCAGGGGCT TTACCTTCCA GGGAGAAACG CTCTAAGTCG 1980
GTGTCTCACA CTACCTAGCT TTTCCTTTCT TCCCCCTCCA GGGAGTGTAT GCGCATGTGT 2040
GATCTTTTTG CTCCTTACCA TCTGTGAACA GACTGAGGGG ATGACTCAGC TGGCCTTTCA 2100
CCAGCTGATT TCACATTCTT TCCACATTTT CTTCCATAGT TACAGAGAGT AGCTTTCCTT 2160
CATAATTTTA GGAGTAACTT TGTGGAGTCT CTCACACACC CCTACCCAAC CTGACTTCAC 2220
GTGACAAAGC AAGAACCTGT GCTTCAATCT CTGAGGCTGA GCAATCACAC TGGCCCTGAG 2280
AGCTTTACAT TCAGTGACTG TAGCAAAAGT CATGACTGCC ACCAGGATTC TATCAGCGAA 2340
GCTGTGGTGT GCCAGCCCAA GGGCCCTGAG TGCCAGAGCA AGATGGATTT CAGTCCCTAG 2400
GCAGCGGGAG CCCCAGCATG CTTTGGGAGC TACAGGACAG CGCAAGTCTT CAAAGTTCTC 2460
TCCCTTGTCA TGCATGCTGC 2480