EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-14440

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr19:46605870-46607320

Target genes

Number: 20
Name	Ensembl ID

Ldb1	ENSMUSG00000025223
Nolc1	ENSMUSG00000015176
Nfkb2	ENSMUSG00000025225
Psd	ENSMUSG00000037126
Fbxl15	ENSMUSG00000025226
Gm17393	ENSMUSG00000091234
Cuedc2	ENSMUSG00000036748
Tmem180	ENSMUSG00000025227
SNORA32	ENSMUSG00000065204
Actr1a	ENSMUSG00000025228
Sufu	ENSMUSG00000025231
Trim8	ENSMUSG00000025034
Arl3	ENSMUSG00000025035
Sfxn2	ENSMUSG00000025036
D19Wsu162e	ENSMUSG00000047731
Cyp17a1	ENSMUSG00000003555
2010012O05Rik	ENSMUSG00000062376
As3mt	ENSMUSG00000003559
Cnnm2	ENSMUSG00000064105
Usmg5	ENSMUSG00000071528

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

INSM1	MA0155.1	chr19:46606976-46606988	TGCCAGGGGGCG	+	6.74
STAT1	MA0137.3	chr19:46607239-46607250	TTTCTAGGAAA	+	6.14
ZNF263	MA0528.1	chr19:46606621-46606642	CCCTCCCCCCACTCCTGCCCT	-	6.33

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_05450	chr19:46602077-46607492	E14.5_Heart
mSE_07996	chr19:46602434-46607220	Kidney

Enhancer Sequence

GCCATCCTTT GAGGGAAATG GACAGAAAAA GGCAGTGTTA GTTGCAAGGA GTGTCCCCAA 60
GAGCTCAGCC TGGAGGGGAC CGGGACCACC TACTCTCTAG GGAGTTTGTT GCCCCCAGGG 120
CCCACCGGGC TCCTTTTGAG AGGGTGGAGG GAGGTTCCTG AGCACAGGAG GGAGACAGCC 180
CATCAACCTC TGAACTTGAG ATGCGTCCTC AGGAACTCCC TCTGAAAAAA TAAACACATC 240
TCACATCTGC CTGCAGAGGA GCTGTCAGGG AAGATTCCAG CCTTTTCTGG CGTTTTCTAA 300
AAGCTGACCC TTACTAGGAC ATTGGTTCAA TGAGCCACCC TTCTGGTTCC CCTGCGTGTT 360
TACAGTGTGA CAGTGTACAC TTGGGTTAAA TTAAATTTCA TTTTAGAAAA ACAACCCTCT 420
GCAGTGGGTG TTCCTCCACA CATGCAGGGG CAACACACAC GTGCTTCTAC AGAGAGGTTT 480
CAGAGTGGCT TCTTTAAGCA CTACAGTAGA ACAGAGGGAA GGAGAGGTTT TCTTAAAGGC 540
ACAGCGACCT TGAAAGTGTC CTTTTTTTTT TTTTTTTTTT TTTTTTTTTT AGAAGGCTAG 600
AGAGGGACTG AGGTAAAAAA GAAAAAAGAA AAAAAAAAAA CCCACACAAT GCCCACAGCC 660
TCCTGGTAGG CAGCACAGTT CCTCACTGAT GCCAGGCCTG TCAAATGTGA CCTCCTTGCC 720
AACCCCCTCT GGAGCATTCC TGGACGCGCC CCCCTCCCCC CACTCCTGCC CTTCAGGCAA 780
GTCAGGCTCC CTTAGAAGCA GGAAGAGAGC TCCAGTGGGT CCTGCAGGGT ATCTTGCCCA 840
GAGTCTGGCA AGTTGCCTCA CCTCTGCGTG CTTATCAGAC ACATGTGACA CCCAAACTCC 900
CAACCCCACA TTTCTGGTGG CTGTGGATCT GGCCGCTGAA CCTGAACACC TAAGACAGCT 960
TATGGCAGTA AATATCAGCT GACACCCTTG GCCACTGGGA CATTAATCCC GTAAACAATA 1020
CATCACTGCA AAACAGCCAG CAGAGCCCCT TTCTCCTGGC TAATCTGCCG GTCACCTGCA 1080
AGTACCCTGA TTAAAACTGC ACTGGCTGCC AGGGGGCGCC GGGGCAGGAG AACCTGACGA 1140
CCTGAGGGAA CTTCCTGCTT TGCCAAGATG AGGCCTAGCC TTGGCAGAAA GCCTTCAGGT 1200
GGGAAGCACC TGGCTGCAGC TGGGCAGTGG GGGATCCGGT GAGGGGGACC CCAAAGCATC 1260
TGATTACAAC TGGGTCAGCT GCACACTCTG AAAAGCTGAG CAAATTTAAA ACCGTTTTAT 1320
GAAAAGGATT CATTTAAAGA GAGCATGTTT AATTTTAGTA GCTAATTGGT TTCTAGGAAA 1380
AAAATGATCA CCTGCCAGGA GACAAAAAAG ATTTTTACAC ATACAAGAGG GATGACTACG 1440
GTGATAACCT 1450