EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-14007

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr19:9071640-9072740

Target genes

Number: 27
Name	Ensembl ID

Slc3a2	ENSMUSG00000010095
Snhg1	ENSMUSG00000090867
Snord22	ENSMUSG00000065087
Wdr74	ENSMUSG00000042729
Stx5a	ENSMUSG00000010110
Nxf1	ENSMUSG00000010097
Tmem223	ENSMUSG00000075043
Tmem179b	ENSMUSG00000079437
Polr2g	ENSMUSG00000071662
Ttc9c	ENSMUSG00000071660
Hnrnpul2	ENSMUSG00000071659
Bscl2	ENSMUSG00000071657
Gng3	ENSMUSG00000071658
Ubxn1	ENSMUSG00000071655
AI462493	ENSMUSG00000071654
SNORA57	ENSMUSG00000070167
Mir5136	ENSMUSG00000093314
1810009A15Rik	ENSMUSG00000071653
Ints5	ENSMUSG00000071652
Ganab	ENSMUSG00000071650
B3gat3	ENSMUSG00000071649
Rom1	ENSMUSG00000071648
Eml3	ENSMUSG00000071647
Mta2	ENSMUSG00000071646
Tut1	ENSMUSG00000071645
Eef1g	ENSMUSG00000071644
Asrgl1	ENSMUSG00000024654

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr19:9072719-9072731	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr19:9072723-9072735	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr19:9072727-9072739	GTTTGTTTGTTT	+	6.32

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

mSE_01383	chr19:8994548-9073615	Th_Cells
mSE_02641	chr19:9054909-9074458	HFSCs
mSE_03059	chr19:9054745-9074150	TACs
mSE_05150	chr19:9071620-9072840	E14.5_Heart
mSE_05857	chr19:9071491-9072977	E14.5_Limb
mSE_06812	chr19:9070453-9073052	Heart
mSE_07393	chr19:9071395-9073072	Intestine
mSE_09164	chr19:9071475-9072948	Lung
mSE_09412	chr19:9064869-9073830	MEF
mSE_10675	chr19:9071669-9073204	Embryonic_stem_cells
mSE_11286	chr19:9068404-9074160	Placenta

Enhancer Sequence

TGTGATGAGT GACTGAATTG TGAAGAATTC TCCCAACCTT CAAAGATCTT TTTGATTTAC 60
CTGGAGGCCC GACTTAACCT TTATGGGAGG AGAGGGAGGA ACATCTGGGC TGGCTACAGG 120
CTCCATTAGT GGAGGACAGA CCAAGAGCTG CTGCCCAGAT GCAGAAAACA AAGTTTGTTG 180
CCACCATGGC CTCCCATCTC TCGTATGCGT CACCATGGCT TTCAGGACCA TGCATGTTGA 240
GAAGGGAGTC CTTCTTGGCC AGTGGCACAG TAGACAGGTG CTTGGCAGAC CCACTTGGGT 300
AGGGCCAACC TGTGGCATGA GTCCGGTGGT TCCTTTTTGC TGTGGTTGAG AGCTTTTCAA 360
CCTCTTTCAA CTTCGCTCAT TAACCTACTG AGTGACACAT ACAGCAAGTC CAGGTTGGTC 420
CTCAGTGCTT TCGGCATCTA AGGACCCTTG TTCCAGGGCT CAATCGGGAG AAGGAAAACT 480
GTGGGAAGTG TACTTGGGTG CCTGGCCTAG GAGGTATTGC ATTGACTAGG CTCTAGGCGT 540
GACCCTATGC ATGTCTGGAG CTGTTGCTGC AGACTGCAGT GACTCACTGT GGAAGGAGGC 600
AGGGTGGGGC CACCATGTGG GTGAGAGTGA GCTGGCTCTC TTTCTCCTCT GCTGGCTCAG 660
CACCAGGATG TTTGGCAGAG CAAGGGGCCC TGCACAAGGA GGAAGGCGGG GACTAGGAAA 720
CTTGAAGGGT GGGTGGCTTC AGTTCTTAGG TGTTTGAGCT TGAGACTTTT ACTTTCCTGT 780
TTCTGCTGGG ATTCTGACTT CTAGTCTGGC TTCTCAGTGT TGGTCCAGGG TAGGGCAGAC 840
AAGCCAGTGC CAGTTTCAAG TTGCAAAGAG TCAGTGTGGC TTTACTCTTA AAGTAGCCTC 900
TTTTGCCTGC TGGGAAGGGA GGGGGTGTTT CCCTAGCTCA AACCTGCACC AGCAGGCTTC 960
TCTCTTGTTT TCTCTTACTC TCTAGCCAGC ACCTGTGTTG TTAAGTAGGC CCATGATAAA 1020
CACTGTGTTT ATGAGTTTGT CAAGTTTGAG AACAGGTGTG GTGATCTAGG TTGTTGGATG 1080
TTTGTTTGTT TGTTTGTTTT 1100