EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-13942

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr19:7245340-7248290

Target genes

Number: 26
Name	Ensembl ID

Trmt112	ENSMUSG00000038812
Prdx5	ENSMUSG00000024953
Esrra	ENSMUSG00000024955
1700019N12Rik	ENSMUSG00000050623
Bad	ENSMUSG00000024959
Gpr137	ENSMUSG00000024958
Plcb3	ENSMUSG00000024960
Ppp1r14b	ENSMUSG00000056612
Fkbp2	ENSMUSG00000056629
Vegfb	ENSMUSG00000024962
Dnajc4	ENSMUSG00000024963
Nudt22	ENSMUSG00000037349
Trpt1	ENSMUSG00000047656
Fermt3	ENSMUSG00000024965
Stip1	ENSMUSG00000024966
Macrod1	ENSMUSG00000036278
Flrt1	ENSMUSG00000047787
Otub1	ENSMUSG00000024767
Cox8a	ENSMUSG00000035885
Naa40	ENSMUSG00000024764
Rcor2	ENSMUSG00000024968
Mark2	ENSMUSG00000024969
AI846148	ENSMUSG00000024970
2700081O15Rik	ENSMUSG00000053080
Rtn3	ENSMUSG00000024758
Atl3	ENSMUSG00000024759

TF binding sites/motifs

Number: 12

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GLI2	MA0734.2	chr19:7246790-7246805	CGGCGTGGGTGGGCT	-	6.62
Nr2f6(var.2)	MA0728.1	chr19:7247504-7247519	TGAACTCTGGACCTT	-	6.32
RREB1	MA0073.1	chr19:7245685-7245705	TGTGTGTGTGTGGGGTGGGG	-	6.68
ZNF263	MA0528.1	chr19:7247082-7247103	CTCCTTCCTCCCTCCTCCTTT	-	6.36
ZNF263	MA0528.1	chr19:7247071-7247092	TCTCCTCCCTCCTCCTTCCTC	-	6.46
ZNF263	MA0528.1	chr19:7247072-7247093	CTCCTCCCTCCTCCTTCCTCC	-	6.68
ZNF263	MA0528.1	chr19:7247096-7247117	CTCCTTTCTCCCTCCTCCCTC	-	6.7
ZNF263	MA0528.1	chr19:7247075-7247096	CTCCCTCCTCCTTCCTCCCTC	-	6.95
ZNF263	MA0528.1	chr19:7246898-7246919	GGAGAAGGGGGAGGGGAAGAG	+	7.15
ZNF263	MA0528.1	chr19:7247093-7247114	CTCCTCCTTTCTCCCTCCTCC	-	7.31
ZNF263	MA0528.1	chr19:7247079-7247100	CTCCTCCTTCCTCCCTCCTCC	-	7.33
ZNF740	MA0753.2	chr19:7246320-7246333	CTGCCCCCCCCCC	+	6.33

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_08026

chr19:7245229-7246669

Kidney

Enhancer Sequence

AGCCATGATA TCATGGACAT GTCTTCCTCC TGGATCATAG TAAATTAGCA GATGTCATGG 60
TGACTTAGGC CCAGGGCCTC CAGACTCTGG GACGAGTGCC TTCGGAGCTC TTTCTCCTTT 120
TGCCCCTGGT CATATGAACC AGGGGTCTAA TGTCCCACAA CTTTATAGGC TTACCAACAG 180
GGACAGCACT GTCTGCTGAT GCCACCGTGC TGAGCCAATC CAGGCAGCCA GCAGTGACAG 240
AGACGTCCCA AGGCCAGCTG TGACCATAAA ACTGGGAACT ACTTAGACTG TTCCAAGGAC 300
AGATCCTAGG TCAAGTGTCT GGGCGTGTGC AGGGCGGGAT CTTGGTGTGT GTGTGTGGGG 360
TGGGGGATTG GGTGTGGGTG TGAGAAAACT CCAGAAAGTA TCAGAACCCA GGCCTGCTCT 420
GGAGACAGGA CTCTCCCAGT CAGCCTGTCT CTCCAGAGGG ACCAAGACTG GGGCTGCCAG 480
TCCCAAGCTT CTCACACAAC CCTCCTTCCC CATGGGAGCC TCTGGGTGGC ATTACCCCCT 540
CCCTAAGTCT TTCCCTCAGG GCTGCTGCTT CCATCCAACC ATGACTTCCT TCCAGCAAAG 600
GACACGCTTT TGATGGTCCT TGAAGCCTAG TTTACACATC CAAGTCCAGC ACGGAGATCG 660
AGCTGTTGCT TAGAGAACAG TGTGTTGAAA GAGACTGGCG TGTGTAAGAA TCAGAGCTAG 720
ATGGTGCTGG GGCCGATAGA CGGGGCAAGA AGACAGAGGA GCAGAAGCCT GAGGGGCAGG 780
CCTAATCAGA GGCCACGCCT CCTGGCAGCA GAGGAAAAGA GGCCGCTAAA GGGAGTGGGG 840
GAGGGGCTGG CATCCAGGAG AGATAAAGGT AGGACCCCAA GATAGAGGAA GCCTGAGGGC 900
CACCCTGGAA TCACCCCAGG AGGGAGAAGA GAATAGAGTG GTGATATCAG TGTCTGAGCT 960
CTGTACTCCA AGGCTTCTTA CTGCCCCCCC CCCAACCCTC CAACCCCACC TGTGGTGATG 1020
TCCTTCTCTG ACAGTGTCTC TCTGGCCTCT GGGGATGGGG TTTGGTTCTC TGCTCTTCAC 1080
ATGCTCCCTC CTACCTCCTG CCCCACTCAC GGTGGCTTTG TGGGCCCCAC AAGGCTCAAT 1140
ACCTAGCTAA CCTTTCAGGG CCAAGGGAAA CCTTCCTGGG ACTATAACTC CAGACACCTC 1200
CCCTCAGGCC TCGGGGGCCC CTCTGCAGAA TCTGTCTGGT ACCACAGGTC AACTGAAGCC 1260
ACTACAGGTG GGAGGGGCTG GAGTCTGAGG ATTCCTGATG GGGGCCCAGG GTCTCCTCTT 1320
GGAGCTGGGG CAGGAGACAC AGACATATTC CAGAACCCTC ATTTGCTACG GGGCAGAGTG 1380
GCAGAGGAAG GGACTGCTAG ACCAAGGCCT CTGAACACAA GACCCTCAGG TGCAGAGCTG 1440
GAGTTCGGGT CGGCGTGGGT GGGCTCACCT ACTAGGTACC CATGCTCCAA CCAACTAGCG 1500
GGGCCTGGCA GGTTTTCAGC TCAGAATACA GCTGAGGCTG GGCATGTGAG GAGCCATAGG 1560
AGAAGGGGGA GGGGAAGAGG GCCAGTGCCA GCCATGGGGC GGGGTGGGAT GGTGTTGCCA 1620
GGCAACCTCC ACGCGGCTGC CACCAAGGAG GGATTCTTAA AGAGCTGAGC AGAGAGGCTG 1680
GGCCTCTGAG GGCTGAGGCT GGGCCTCGCA TACCAATGGC AGCCACGCAG GTCTCCTCCC 1740
TCCTCCTTCC TCCCTCCTCC TTTCTCCCTC CTCCCTCCAC AAAGTAGAGC CGGAGCTTGG 1800
AGATCAGGGG GACAAAGAGG AGGCCACCCG TGTCAAGGGA CTCTGGGGCT GTCAAGGCAA 1860
GGGCCAGGCT GAGTTCATCT CTGTACCCAG AGAAGCCTTG GATGTAGTTA GACAGCCTGT 1920
AGGGTACTTG ACACCCTCAA CCCCCAAACC CCTTAACATA AGTCCTGTCC CAGCTGACTA 1980
GTATTAGAGT CAGACACAAC AGGTCTCATC TCTTCTTGGC TGAGCAACCT TAAGCAGTTT 2040
TTTTTTTTTA AAGATTTATT TATTTATTAT ATGTAAGTAC ACTGTAGCTG TCTTCAGACA 2100
CTCCAGAAGA GAGTGTCAGA TCTCGTTACA GATGGTTGTG AGCCACCATG TGGTTGCTGG 2160
GATTTGAACT CTGGACCTTC GGAAGAGCAG TCGGGTGCTC TAACCCACTG AGCCATCTCA 2220
CCAGCCCCCT TAAGCAGTTT TTGTCCCGAG AAACCTGAAG TGACCACAGA GAGCCATCAG 2280
CTCTGAAGAG GAGATGGGTT CCTGACAAAG CTGTGTCTGG TGGCAGAGAA AGTCCTTCTT 2340
GTTGTCTAAC TTGAATTTCC CTTGCAGAAA GCAGTCCCTG CCTTTCTCCT GTCTTTATTG 2400
CTTGCCTGGC TTCAGACAAC CTTGTGTTCA GGGACTCAGC TGGGCAGCTG CTTGTCCCTT 2460
CCTTTTAGGG GACCCCTTTC CCAGCCATAC AGGGGAGCTA AGTCTGTGGA GGTGGGTCTC 2520
TGAAGCAGGG TGTCTGCCCC AAGTCATAGA CAGTGACTTA TGGTGTCATC TGAACAAGAG 2580
TCAAAAGTTG TCCCTGGGAC ACGGGAGTCC TGTGGAACCC CAAGGGACAA GGGGCCTCAC 2640
TGGGTGGGTA CAGGGTCACT CTCTCCTTTT TGTAGCCGTG TTTCCATGGC TCTCTTCCAG 2700
CTCTACCGTA CTCAATGTCA GCTCAGCCTT CCAGCTCGCC CAAGCTCTAT CACCTTCATG 2760
GCTCTCTCAC CAAAGCTGAG ACCCCTCCCT GAGACCCACC GGGGGCCTCA TTCTCCACCC 2820
CATCTGCACC CTTCACTGCC TGTCACCCTA ACACAGAGAC ACAATGTCTG TTCAGTGAAT 2880
AAGCCATCAA CCTGCTTGGT CTGCAAGGGT TGTTTTGTTT GGGAATGAGG AGATGACTCT 2940
GAGTTCAAAT 2950