EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-13901

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr19:6533210-6534470

Target genes

Number: 15
Name	Ensembl ID

Ppp2r5b	ENSMUSG00000024777
Mir192	ENSMUSG00000065523
Ehd1	ENSMUSG00000024772
Cdc42bpg	ENSMUSG00000024769
Men1	ENSMUSG00000024947
Map4k2	ENSMUSG00000024948
U7	ENSMUSG00000087828
Sf1	ENSMUSG00000024949
Gm14966	ENSMUSG00000079467
Pygm	ENSMUSG00000032648
Rasgrp2	ENSMUSG00000032946
Nrxn2	ENSMUSG00000033768
Gm14964	ENSMUSG00000052188
Slc22a12	ENSMUSG00000061742
Hmgb1	ENSMUSG00000084221

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR2	MA0258.2	chr19:6533978-6533993	AGGTCACACTGACTC	+	6.31
RFX1	MA0509.2	chr19:6534213-6534229	CGTTGTTATGGTGACC	-	6
SOX10	MA0442.2	chr19:6534347-6534358	TGCTTTGTTTT	-	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_03678

chr19:6532955-6535980

Cerebellum

Enhancer Sequence

AATTCCACCA GTCCTGTGTA GTTTGTTCGG GGTGGGTGCT CTCAGTGGGT GCACCTGACA 60
GTTGCTAAGT TTCCTCTAAA TACTTTGTGT GTGATGTGTG TACCGTTAGA GGACATCTTA 120
GAGGGATCAG TTCTCAGCTT CCACAATGTA GGGCCTGAGG ATGAGATTGA AGTTTCAGTC 180
TTGATGACAA ATGGCCTTGC CCACTGCACC ATCACTGAGC CGTTTCCCTG AACCAGCCCT 240
CTGACTTGAG TTGAATACAA CATTGGGCTC TTGGACAACT GTTGTACGTC TGGCTTGCAA 300
GTGTTTGCTG AGTGGGCTGA GGGTGGGAGA CAGGCTCGGC TTGTGTGGGA GGGAGGGAGA 360
TTGGCATCTG GCTGGGGTTC CCGATGGCAT CATGTTGCCC TCTTTTCCGA GGCTCTGCAC 420
CGGTCACTCA TGTCCTACCA GATGGCTGAC ATCCTACCAG ATGGCTGACA TCTTGTCCAG 480
TATTTGGAGG AAAGTAGTCT TTCCTGGTGG CCAAGGTGGC TGGCAGTGGC TAGTTCAGGG 540
CCTCAAGTGT AGCAGTGGCC GAATCCCTCT GAGTACTTGT TCCTCTGTCC TGTGACTTTG 600
CCTGCACCTC TTGGCTCTGC TTCCCAGCTC TGTAGCACGC CACCACCCTG GAGTGCTGAC 660
CACTGGGTGG CTGGCTCTCT GTGAGTGTGG CCTCTCCTTG GCCTTCTGAA CCCATTGGCT 720
TCCAGCCCCG CTTGCCATCT TGGGCAGATT TGGTCTGGGA GCCTGGGGAG GTCACACTGA 780
CTCTCCTGTG GGAGTCTGGG GAGGCTTTGA CCAGGGCAGC GCTGTCCCAG GGTGTCCTGT 840
CCCCAGCTGG TCATGGACTC ACTCCTGGGC CCTGTGTTAC TGTTCTCTTC TCAAAGCCCA 900
GGCTCAGAGC CCTGTCCTCA CCTGCATTGT TAGTCACAGA AAACAGACAG CGGGAGTTCC 960
TTGGGGACAA GCCTGGAAGG AATGCCTTTA CTCTCACTTC AGCCGTTGTT ATGGTGACCC 1020
TGGTTGAGGC AGGAATGTAC TCTAGGAGTT GAAAGGACGG CTCCATCACC CTGGTTGCCT 1080
TGTAGTTGGG GCTCCATCTC CCTCTCTGCA TCAGAAGGCC AAGACCTGAC ACCCAAATGC 1140
TTTGTTTTCT AAAGAGCTCT GGATGTGGCT TTGACTCGGT TTACCTTTCC GAAAGAGTCT 1200
CTTGGCTCCT CCACTGTGAG GGTATCTCAG CAGCTTTGAG GTTAGAAACC TCCAAAGTAG 1260