EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-13790

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr19:4711640-4713160

Target genes

Number: 18
Name	Ensembl ID

Ankrd13d	ENSMUSG00000005986
Pcx	ENSMUSG00000024892
Lrfn4	ENSMUSG00000045045
Rce1	ENSMUSG00000024889
Gm960	ENSMUSG00000071691
Spnb3	ENSMUSG00000067889
Rbm4b	ENSMUSG00000033760
Rbm14	ENSMUSG00000006456
Ccs	ENSMUSG00000034108
Ctsf	ENSMUSG00000083282
Zdhhc24	ENSMUSG00000006463
Bbs1	ENSMUSG00000006464
Dpp3	ENSMUSG00000063904
Peli3	ENSMUSG00000024901
Mrpl11	ENSMUSG00000024902
Npas4	ENSMUSG00000045903
Cnih2	ENSMUSG00000024873
Rab1b	ENSMUSG00000024870

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr19:4711966-4711976	GCCCCGCCCC	+	6.02
TEAD1	MA0090.2	chr19:4712984-4712994	CACATTCCAT	+	6.02
TEAD4	MA0809.1	chr19:4712984-4712994	CACATTCCAT	+	6.02

Enhancer Sequence

GGAGGTAAGT GACATTTAAA GGGGTTGCGC ATCCAGGCAA AGGCGCGACA GAGACAAAGG 60
TGGAATTCCA AACTGGGAAG AATAAGCCTG GTTAACTGTG GGTGGTACCC AGACGCCCAA 120
GGGTGTCGCG GGGCTGGCGA GGACCGGAAG GTGGGGGTCA ATCGGGGCAT CCACGCGGAA 180
GACAGTGGGG GGTCGGGAAC TGGCGAAGGA GCGAACGTCC TGCGTTTGCC CCGGGGAAGG 240
TCAGAGACCC CCTACCGGAG AACTACTGCA GGAACCTAGA GGGGCCGCGG TTGCCATGAC 300
GCCGGGTGGG GAGGGGGATG ACTCGCGCCC CGCCCCAAGC CCCGCGGGGC CGCGAGCTCC 360
AGATGGTCCC GGGCCTCCCG CGGGAGCCGA CGGCCTGCGG CAGGGGGAGG CTATTGTCCT 420
CCTTCCGCGG CGCCGCAGTC CCGCCGCTCG CGCCCGCGCG CAGCCGCCAC GCGCCCCGCG 480
GCCGCCGGCC CCGCGCGCCC CCCGCGCCGC TCGCGCCCTG TGACAGCGCC CTCCTGCCGT 540
GCGCCCTGGG CCGCCCCGCC ACCGCCGCCA GTAACCTCCC GCAACCACCC CTCGCGACCG 600
GGCTGTGGGC GCGGCGACAA GTGTGCCCCC ACTAGCCGCG CTCCCCGTGC CCGGCAGGCG 660
CTCCGCACCC AGGTAGGTGC AGCCGGCGCC CCGGCCCGCT TTGTCCCGGC CGGCAAGGAG 720
GCGCGCTTTG TGCGGCCGCG TGCAGGCGGC GGGGTCGGTC CTGGGGAGCT CAGGAGGGAG 780
GATGCGACGC CGAGTTCCCG GGTCCTGTGC GGGACACCCA GGTATCGCTG TGAAGATTCT 840
GGGGGCCGAG GCTTGGGGCA CGCGGACCTC TATGGAGCGC AGAGAAGAGT CTGGAAGAGT 900
TGGGCTGACA GACGCGCTGA TGGATCGGGG TCGCCTGGGC TCGGAGCGCT TCTGGCAGCG 960
CATGTTTTTA GCGGTGCGTC GGTTCCTGCG GCGGACCGGC CAGTGCTGGT AGTGGGACTG 1020
GGGACGCACT AGGTCTGCCT GGGGCCTGTG AATACCCAGC TTCATCTAGC TCCGCAGCTT 1080
GTTGGCTATG GTGCTGCGTG GGCTTTTCCT CCCCACTGTG GTAGCTATAG CTCCATGCTT 1140
CCTTTTAGGG CTCTCATTGA TAAGAGAAGT GGACACGGTT GGTGGAAATG GCTGTAGCTG 1200
CTTGAGAGGA TAAAACCTCT TCGGGCAGTG AGGAAGTGTT GTGTAAGGTG TTTCTGGAGC 1260
CCCTGTACAT TTACAGGCCT GTGGATTCTG CCTGTCACAC AACTACCCAG CAAGGCTGCC 1320
TGACTGGGGT TCCAATTCTA GCTCCACATT CCATAAACAC CATCTACTTT GGCTCCAGCC 1380
TCCTGCACCC CAGGAGCCCA TGCATGACAC TGCATGCTTG TCTGAGATGC AGGTTTGATT 1440
TCTCCGTGGG CTGTTTCTCA GCTGTCTTCC CCCATTACAA TTCCAATTTT AAGAGCCTGT 1500
GTTTGTAGGT ATTGTCAGTA 1520