EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-13144

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr18:38368790-38369210

Target genes

Number: 13
Name	Ensembl ID

Pcdhga9	ENSMUSG00000023036
Hdac3	ENSMUSG00000024454
Rell2	ENSMUSG00000044024
Fchsd1	ENSMUSG00000038524
Arap3	ENSMUSG00000024451
Pcdh1	ENSMUSG00000051375
Gm10268	ENSMUSG00000066475
0610009O20Rik	ENSMUSG00000024442
1700086O06Rik	ENSMUSG00000086988
Pcdh12	ENSMUSG00000024440
Rnf14	ENSMUSG00000060450
Gnpda1	ENSMUSG00000052102
Ndfip1	ENSMUSG00000024425

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_04219	chr18:38368769-38375092	Cortex
mSE_07596	chr18:38363012-38371661	Intestine
mSE_08522	chr18:38363955-38372562	Liver
mSE_10826	chr18:38368728-38373261	Olfactory_bulb

Enhancer Sequence

TCTGCAACAC CAACTACCTT TGTTCCTCGC AGGGGCACCT CTCACCCCAC AACAGAAACG 60
GAACTCGGAT TCCCTCTTAG CTCCTCCCCA CCCATGCAGG CCCCATTCCA CAGTGTCTCT 120
TGCCCAGCTC TCAGCAGAAG TCCCCAGAGC TGGGAGATAG ATACTCCTTT ATAGCTAGTG 180
CCTTCTAATA TGGAACTAGA GATGGTAGGA GAGGAGGCTA GATGAGGCTG CTCTAGAGCC 240
CCGACCCTGT TCCCCCTACC CTATTTTTCC TCCTTTCTGA GGTTTCTTAG ATTCTCTCCT 300
GGAATCCATC CTCTGCCCTC GCCCAGTTAT TACAGGTTCC AACACCACCG CGGACCCCCC 360
TACTCAAGAA AGTAGCACCC AGGTGCTCTC ACACACTAGA CCTCTAAGGC TGCCACAAAT 420