EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-13076

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr18:35626610-35628330

Target genes

Number: 17
Name	Ensembl ID

Ctnna1	ENSMUSG00000037815
Lrrtm2	ENSMUSG00000071862
Sil1	ENSMUSG00000024357
Gm5239	ENSMUSG00000062742
Snhg4	ENSMUSG00000090430
SNORA74	ENSMUSG00000088059
Snora74a	ENSMUSG00000065649
Matr3	ENSMUSG00000037236
Paip2	ENSMUSG00000037058
Slc23a1	ENSMUSG00000024354
Gm1614	ENSMUSG00000073600
Spata24	ENSMUSG00000024352
Dnajc18	ENSMUSG00000024350
Ecscr	ENSMUSG00000073599
Tmem173	ENSMUSG00000024349
Ube2d2	ENSMUSG00000091896
Cxxc5	ENSMUSG00000046668

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFIC	MA0161.2	chr18:35628016-35628027	TCTGCCAAGAA	-	6.02
POU1F1	MA0784.1	chr18:35627423-35627437	CTCATTTGCATAGT	-	6.41
SOX10	MA0442.2	chr18:35627476-35627487	AAAACAAAGGA	+	6.32
Sox3	MA0514.1	chr18:35627476-35627486	AAAACAAAGG	-	6.02

Enhancer Sequence

TGGAAAAGTC CTCTCCTAGC CACCAGGGAT CTCTGGCCAG GCAACTGTTC ATGGGATCTG 60
AAAGCCTAGA TGGGACAGCC TTAGCCTGCT CAAGCACTGT TCCCAGCTGT ACACAATCTA 120
CACACCCTAC AGCATCTACC CCCTTAATCT ATGGTTTCTC TTCCTCATCT CTTCAACTGC 180
CAGCTCCACA GCCCCACAAG ACACCAGACT GAGCCCAACA GTTCCATCTC CAGAGAAGAC 240
CTCCTATCGC CCAAAGTCCT CAATGCCCTT AAAATTCCTG GCCATGTAAC ACAGACCTTC 300
TAATAAAATA CCTCAGATAT GTTTCTCTTT GCATAGCACC CCAGAGTCCC AGTCAGATTA 360
ATGAGTGACA GATAGGACTA ATGTGTCATC CCTGCACAGC TCAAAAGGCT ACTGAAGAAA 420
AAAAACTGCA ACTAACTACC TGAGACTGGG CCTGTTGCTT CATCAGAGAG AGAAATGTGA 480
CAAGATGCCA TAACTGACTG TTGCTGGGTT AAGTACTAGA ATTGGAGGGA GACAGTGGGA 540
GGTGAATACA TGGATATGCT TAAGATATAT TGCTGCATTA AAAAAATTAT TGAAAGTCCA 600
GAAAGAAACA AGTCCTTATC CAGAATCCTA CAAGATAAGC TGCTCCAAAC AGCAAACCCA 660
CCAGAAACCA GCGGCTTGGT TCCAGTCAAC CCAGAAGCAG CAGGATGACA TAACAACCCT 720
GTCAATGAAA TCAACAGCAC CCTTTACCAC AGAGCTGCCT CTCTCCAAGC CCAACCTCCA 780
TCCAGAACAA ACCACCAGCC AGCCAGGACT TCCCTCATTT GCATAGTGGA AATGTGCGAG 840
GGTGAGGGAT TTCCCAAAGT CTAGCTAAAA CAAAGGAATT TCAAAATACC TCTGGGCGCT 900
CCCCAGCCTA CTGTCTCAGG CAGGTGCTTC TTCTGTTCCT GCCGGGCCTG CTTCATTCTT 960
GTGGTACACT CAATAAATTA CTTTCTTCTA AAAGAGAAGA AAAAGAAAGC GGCAGAGCAA 1020
GAATTGAGGA AGTCTAGGAA GATGGTGACA ATGAAGACAA AGCAAAGCAT AGATTCAAAG 1080
ATGCCTGTGA AGATTTAGAG TGCTGTGGCC TGTAGCCAAG AAACGCTGGT GGCAATCAGG 1140
AACAGAAAGA AGCAAGGGTC AGGATCTGCC CTAAGCCTCC AAAAGCACAG CAATGCCAAC 1200
ACCTGGTTTC AGGCTAGTAG CAGCCATTTC TTCTGAGGAA ATAGATCTCG GCTGCCACAG 1260
CAGCCACAGG AATCTAGAAC AAGTGGTTAG TAAAGCGGGG CACCGATCCT GGGTCCTGGT 1320
ACTCCAAGCT TGCGCTCTCG GGCACTGTGT GTTGCTCTTT TCCTGCAAAC AGCCTTCCCA 1380
AATCAGATTC TCCACCTGTG AGTGTCTCTG CCAAGAACAG AAGCAGCCAG GACTCACAGC 1440
TCTTCCTGCA GAGGAGCCTC CTCTTTCTTC CACACCACAG CAAACACTTA GCAGTGACTG 1500
AGCAACTTGC TGGCGTGCTC ATGAGTACAT ACAGAGCATC CAACATCCTC ACGAGAAAGC 1560
ACTGCACCTG CCTAACAAAG GGTCTCATCT AACTTACTGT GGGCACTCAA CTGTCACCCA 1620
CACCCAGGAG CTCCTAGCTG TGATGTTCCA CTCCATCTAG TCTACAGTTT GTTCTTCTCC 1680
ACAGATTGGG GATGAGGCAA TATCAGCCCC AGGCAGTTCA 1720