EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-12456

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr17:56518620-56520430

Target genes

Number: 28
Name	Ensembl ID

Shd	ENSMUSG00000039154
Fsd1	ENSMUSG00000011589
Mpnd	ENSMUSG00000003199
Gm16276	ENSMUSG00000084755
Sh3gl1	ENSMUSG00000003200
Chaf1a	ENSMUSG00000002835
Ubxn6	ENSMUSG00000019578
Hdgfrp2	ENSMUSG00000002833
Sema6b	ENSMUSG00000001227
Tnfaip8l1	ENSMUSG00000044469
D17Wsu104e	ENSMUSG00000019579
Dpp9	ENSMUSG00000001229
Fem1a	ENSMUSG00000043683
Ticam1	ENSMUSG00000047123
Plin3	ENSMUSG00000024197
Kdm4b	ENSMUSG00000024201
Ptprs	ENSMUSG00000013236
Safb2	ENSMUSG00000042625
Safb	ENSMUSG00000071054
2410015M20Rik	ENSMUSG00000049760
Rpl36	ENSMUSG00000057863
Lonp1	ENSMUSG00000041168
Tmem146	ENSMUSG00000040828
Ranbp3	ENSMUSG00000002372
Ndufa11	ENSMUSG00000002379
Dus3l	ENSMUSG00000007603
Rfx2	ENSMUSG00000024206
Mllt1	ENSMUSG00000024212

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

STAT3	MA0144.2	chr17:56518914-56518925	CTTCCCAGAAA	-	6.02
Spz1	MA0111.1	chr17:56520038-56520049	GCTGTAACCCT	-	6.14

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10789

chr17:56518592-56521150

Olfactory_bulb

Enhancer Sequence

ACAGGCTGGA GCAATTCTCC ACAGGTCACT AACTAGATCA AAGGGGTTCT CTTAGCGAGG 60
GGGCGCCTCC TGTACAGCCC TGCCTGTCAC TGGCTGCTGC ATCAGCCTTT GCAAGTCACA 120
GGCCACACAC ACAGTGTGGG AAGCTCAGCC CTGGTCCACA CTGCAGGGAA GGGTCTCATC 180
ACGACCCCAC CAGGCTGAGC TGTGGTGAGA CCAGGGTGTG ATTGAGAGCC TGGCTCTAGC 240
TGCACGTTCA GCAGCTTCTC TGTCCCCTTG CCATTTCTGT GGCCAGATGC CAGTCTTCCC 300
AGAAATACGA CACTGGAGTT GGAGGGAAAG TCTGGAGGTA GCCTCCTCTT TGCATATCGT 360
CATGCCCTTG TGGTAGACTG GTAGCAGCAG GCCCTCAGCA CAGATTAATG ACCAGGTAAG 420
AACTGGCAGC CTTGTTTCCT GCTGTGGGTG ACAGTTAGTT GCAGGCTGAG AGGCATAAGG 480
CTGGCCTGAA ACTGCAGTCA CAGGGTCTGA GGTCGTGCCA CCAGCTGGTC ATTTGCTCCA 540
CTGGCCCCTG ATCTATGCTG TGGCAGGGCT GTATGCACAT GATGGCTATT GTGAAGTGTG 600
TTCCTCCTCC ATCCCTGTCT CATGACTTCT GCGCTATGAG TCCCAGAAGG CCAGTGGGAG 660
CACAGAGGGT CCTGTGTAAG GCTGACACAG CCTTCTTGTG GTACAGCTGG CCACTGTTAG 720
GTAGAGGGAA GATCTAGAAA GGTAGCCTAG CATGAGTTCC CCAGCACAAT ACATGGTCTT 780
GGCGTTCTCT GTGGGGTATC CTAGCCTTGT ACCCCATGTC AGAAGCCCCA ACAGCCCTGG 840
TGGCAACAGT GTTCTTAAGT ATCATGTAAG GTCTTTGGTG GAGGAGGTAC ATGCTGATAA 900
CCCCCTGCCC CCTGCCACTG ACTCCCCAGT AGGTTAAGTG AAGAGTACAT CATGGACACC 960
CCACATTATG TAGCCTGTGC ATTACAATCT TGTCCCAATT TCCCTATGAG TAAACTGGGG 1020
CTCCAGGGGT TCCCATGGTA AGGGGTGCTG GGAAGTTGTG GGCTGCCCCA GAAGGCCATG 1080
ATGGTCACAC TGAGGTTTGC ACAAAGCAGG GACTGACAGG ACCCAGACAA AGAGCACCGT 1140
CAGGGGAGAA GACAGTCTAG TGCTGCCAGC TCCCTGCCAC TCAGGACAAG TGGCCTCTGT 1200
GCCAAGAGGG GTGAGGTGGG TGTTGTCATG GGTACAGTGC CACACAAGGG GCATCATGAC 1260
ACCAGAGACT GCTGAGGGGC ACAGGCCCCA CCAGGCAGCA CTGTGAGCTG GCGCCTAATC 1320
ATCCTGTGCA CAGTCCCTCT GGCTCCCTAA TGAACTGGCT GCCGTTGCAG CGCTGGCAAT 1380
CGTAGCAGAA ATGGGCCAAG CCGCAGCTAG AGTTCTGTGC TGTAACCCTT AGTGGGCCAG 1440
AGTGTCTCCC TCAAACAGAT GGCTCTTCAA AAATGTCCCT TCAATCATTG AGCTTGCCTT 1500
CCTCTGCTAT GGGACTGGTG CACTTCTGTC ACCCTAACAC TCAGGACGCC GAGACAGGAA 1560
GATTGCCCCA AGTTTGAGGT CAGCCTTTTT AAAAGGTATT TCTGACATGG AAAGCTATGG 1620
TAGCATTGAA AAAGGGTGTG CATAGCCACA GCCAGCTGGT ATGGTACTGT GGTTTAGCAA 1680
GGTCCACTTT TAAGAACTGA CAAACCAGGC CTGAGCCAGG CATCCAGAGG ACCCACTGTG 1740
GCCCAGTCTT CATCAGGTCA GCAGGGTTGA TCAGCACCCC TCCTGCAGCC TGTAGTGTGC 1800
CCCTACCCTG 1810