EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-12317

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr17:46408870-46409510

Target genes

Number: 20
Name	Ensembl ID

Vegfa	ENSMUSG00000023951
Mrps18a	ENSMUSG00000023967
Rsph9	ENSMUSG00000023966
Mad2l1bp	ENSMUSG00000034509
Polh	ENSMUSG00000023953
Xpo5	ENSMUSG00000067150
Polr1c	ENSMUSG00000067148
Yipf3	ENSMUSG00000071074
Gm88	ENSMUSG00000071073
Gm17358	ENSMUSG00000091684
Tjap1	ENSMUSG00000012296
Dlk2	ENSMUSG00000047428
Abcc10	ENSMUSG00000032842
7SK	ENSMUSG00000065808
Crip3	ENSMUSG00000023968
Gm5093	ENSMUSG00000091742
Ptk7	ENSMUSG00000023972
Cul7	ENSMUSG00000038545
Mea1	ENSMUSG00000002768
Ppp2r5d	ENSMUSG00000059409

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr17:46409221-46409241

CCACCCCCCAACCCCACAGG

6.11

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_09703

chr17:46409030-46413861

MEF

Enhancer Sequence

CTCCGGAGCT GCAAAGAGAG AGCACAGAAG ACCAAACTGA AGGATGCCTC TGGCACATAC 60
AGTACTCTTT TGTGGGCGAA AGCATCTCAG GGGCTTCCCG CCACCAGAAA GCACTCCGGA 120
GGAAGACCAA CACCCCACCT TGCCAACAGT GAGTCCAGCT TACTAATTCA CACAAGGCTC 180
TCTGGTTGAT CAAGAGAAGG CAGCTATTGT GTGGAAAGCA GCTCCCTGTC TCCCTAATTC 240
CCAACTGCAC TGCCAGGCTG CACCAGGACT CTGAGCACTG GCTTATAAGA ACAACCCCCT 300
GCCCCCAGAT GCAGTTGCCA CTCATCCAGG CCTATGCCAA CAGAGTGCAC TCCACCCCCC 360
AACCCCACAG GCTCTGGGCG AAGAACTATA AGAGATGAGC TGGAGTCAGA GCCTGGAGGA 420
GAGCTGCATC AGAATACACA AGTACAATGG AGCAGTGTGT GACGAAGCCC CAAAGTGGGG 480
CCACTCAAGG AAAAGGTGAC ACACTGCCAG ACAGATGACC TACAGAGCCC TCTGAGGACC 540
CCACAGAGTG AGGATGACCA GGCACAGCAC AACTCCCCAG GCTCTGACAG GGGCTCTTCC 600
AGTCTGTCAG AACCCTAGTT CTTTTTTTTG GGGGGGGGGG 640