EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-11982

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr17:29257380-29258070

Target genes

Number: 10
Name	Ensembl ID

Kctd20	ENSMUSG00000005936
U2	ENSMUSG00000084632
Stk38	ENSMUSG00000024006
Gm16196	ENSMUSG00000086154
Srsf3	ENSMUSG00000071172
Cdkn1a	ENSMUSG00000023067
Cpne5	ENSMUSG00000024008
Ppil1	ENSMUSG00000024007
BC004004	ENSMUSG00000052712
Mtch1	ENSMUSG00000024012

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myog	MA0500.1	chr17:29257544-29257555	CTGCAGCTGTC	-	6.62
Tcf12	MA0521.1	chr17:29257544-29257555	CTGCAGCTGTC	-	6.14

Enhancer Sequence

GCTGAGGAGG GAACAGTAGA GCTTAAGATC AGTTACTCTG ATGCTGTTGG AGTCCAGAAC 60
CTGAGCTGGA GCAAGGACAG CAGGAGTTGT CCAGGAGCAA TTCTGCCTCC AGACAGCAAA 120
ATCCCAAAGA TTCGAAGGCA GGACCTTCCT GTCTTGTGTT CCTCCTGCAG CTGTCAGTGC 180
AGGCTTCCAG ACTGGCACAG AGACTGGAGG AGTTAGGCGA AGAGCTCAGA AGGCAGCTGG 240
AAGTGAAGGG GGTCTTCCAC AGGGCAGGGG CTTGAGCAGG TGGATGTGGA CCAGGCTATG 300
CAGGGGCTCT GTCAGCCATG GAAGGATGGG GACACTGGCT GTGCTCAGTA GCTGGGGAAC 360
GGGGATGGAT TCAGTGGTTC ATCACCCTTT TCTCCTCTGT CCCCAGGCCT GAGGCACAAT 420
GGAGAAAGGA AAGGGAGTGT CCAGAAAAGG CCGGAAGCTG GCATCCAGCC GGCGGAGGCA 480
GGCACGAGAG CCAGCTGACG GTCAGGATGC CCCCGTGGCC GCGGAGGCTG AGTCCTGGCC 540
CTCTGATGCT GATGCGGAGC TTCAGGGCTT CTTCCAGGAC TGTGGAGCCA AGGAAAGGGG 600
CTTTGTTACC CGGGAGGATC TGGCGGTGAG CATGGGGCCC TGGAATCACA CCTGGAATCC 660
TTTCGTGCAG ATTCTTGAAT TTTCCTATTC 690