EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-11823

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr17:25695780-25697750

Target genes

Number: 20
Name	Ensembl ID

Gnptg	ENSMUSG00000035521
Cacna1h	ENSMUSG00000024112
Sox8	ENSMUSG00000024176
2810468N07Rik	ENSMUSG00000091475
Lmf1	ENSMUSG00000002279
Gng13	ENSMUSG00000025739
Chtf18	ENSMUSG00000019214
Rpusd1	ENSMUSG00000041199
Narfl	ENSMUSG00000002280
Haghl	ENSMUSG00000061046
Ccdc78	ENSMUSG00000071202
Fam173a	ENSMUSG00000057411
Gm17480	ENSMUSG00000091321
Metrn	ENSMUSG00000002274
Fbxl16	ENSMUSG00000025738
Jmjd8	ENSMUSG00000025736
Mir3082	ENSMUSG00000093076
Stub1	ENSMUSG00000039615
Rhbdl1	ENSMUSG00000025735
RP23	ENSMUSG00000093593

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GFI1	MA0038.2	chr17:25696653-25696665	CAAATCACAGCA	+	6.52
Gfi1b	MA0483.1	chr17:25696654-25696665	AAATCACAGCA	+	6.62
RREB1	MA0073.1	chr17:25695833-25695853	GGGAAGTGGTTGGTTGGGTG	-	6.54

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_04091	chr17:25697520-25698705	Cortex
mSE_11116	chr17:25697378-25698212	Olfactory_bulb

Enhancer Sequence

AATGGGTGGA TGGATGGATG GATGGATGGG TGGATGGATG GATGGCATAT GGTGGGAAGT 60
GGTTGGTTGG GTGAATGGAA AGATGTATAG ATAGTGGGAT AGGTGAGCAG ATGGGCGATG 120
GATTAATTAG AAGGGGTAAA TGGTGGGAAG GTGAATAGAT GGTAGATAGA TAGATAGATA 180
GATAGATAAT GGGTGATTAA TGAATGGATA GATGGATGGA TGAAGGGAAG TGGACTGTGG 240
CAGAATAGAC ATATGGAGTA AAAAAATGAC CCTGTAAATG TTAAATCCTT GCTTATCACA 300
CGCTGGTGCA GTTTCTGTTT CTAAGGCTGA ATGAAAACTC TGGGCGGTGT CTAGTGAGTG 360
CTCCTTACGA AACCCCGCTC TAAGCCTCTG AGCCCAACAC ACCTCCTGGG CACCATCCTT 420
GGGGAACAGA TGTCAACCTT CCCATTTTAC AGATGAAGCT CAAGAAACCA CCAGTAGCTT 480
CTCCACAGCC AACCATGTTT GGAGGTTAGC AGGAGCTCCA AGCATCTCGG TCTCTCCCTG 540
CCGAGGTGAT CAGACTTCAC ATGCATCCCA GAGACGTTCT AAACCTCCTC AACACCTCTC 600
TTCCTGTTGG GGAGCAGCTA AAGCTAGGGT CCCCAAGCAT TAGCCTACCT CACCCCTGCT 660
TATGCTGTTA GTAAATACAT TTCTTGGATG AACTGAGTGG CCCCAGGAAC TGGGAGAGAA 720
GGCAGACAAG GGCACTATGT CACATTGCAG TTGGTCTACA GAATACCCTG AGAAGAGCAA 780
CTTAAGGGAG AAAGATTCTA GCTCAGCTCA CAGTTTGGGG GAAGCTGGCC ATAGGCAGGG 840
GAGGCAGAGC GGTAGGACTT TGAGGCAGCT GGGCAAATCA CAGCAGTGGT AAGGAACCGT 900
GACTGCTGGG ATCTGTTTGA TCTTGCTCCT TTTCACACAG TCCAGGACCA AAGCACAGGG 960
CCACCCATTT TAGAGTGGGT CTGTTCCCAT TAATTAACTT AATCATGATA ATCCCTCACA 1020
GGCAAGCCCG GAGGCTAACA TAATCTAAAT AATCTCTCAT GGGTGTTCCT GGACAATTGC 1080
CTCCTAGAGG GTTCCAGATC TTGTCAAGTT GACAACCAAT ACTAATCACC ACAGACACCT 1140
CAAGGGGATA ATGTGGAGGG TCCCAGGACC TCCTCTGCCT CGAACACAGA AGAGCAAAGG 1200
AGATGAACTT CCTCATCAGG TGTCACATGT CGAAAGTAAT GAAACAATTC CACGCAGTGC 1260
CCAGTGTCCT GCTATGAGAA CGGATTGGGA GGTGGGTGGA GGATGGACAG ATGATGTCTC 1320
CTTAACCTGG AAACAGGTCT GGCTACTGCT CCAGTTGGAA CAAAGTGGGG CTGTACCTCC 1380
TGCCTGTCCC CCAGGGTCCT CCAGTGCCTG CCCCCCGAAG GGTCCTTAAC TGCCTGCCTG 1440
TCCCCAGGGT CCTCCACTGC CTGCCTATCC CCCAGGGTCC TCCACTGCCT GCCTGTCCCC 1500
CAGAGTCCTC CAGTGCTTGC CCCCAGGGTC CTCCAGTGCC TGCCCCCAGG GTCCTCCACT 1560
GCCTGCCTGT CCCCCAGAGT CCTCCAGTGC TTGCCCCCAG GGTCCTCCAG TGCCTGCCCC 1620
CAGGGTCCTC CACTGCCTGC CTGTCCCCCG GAATCCTCCA GTGCCTGCCT CCAGGGTCCT 1680
CCACTGCCTG CCTGTCCCCC AGAGTCCTCC AGTGCCTGCC CCAGGGTCCT CCAGTGCCTG 1740
CCTGTCCCCC AGGGTCCTCC AGTGCCTGCC TACCCCCAGG GTCCTCCAGT GCCTGCCCCC 1800
AGGGTCCTCC ACTGCCTGCC TGTCCCCCAG AATCCTCCAG TGCCTGCCCC CAGGGTGCTC 1860
CAGTGCCTGC CTGTCCCCCA GGGTCCTCCA GTGCCTGCCC CCAGGGTCCT CCAGTGCCTG 1920
CCTCTGTCTA CGCTTGGGGA TGGTCTCCAG GCAGGGCAGT TCCTCCCACA 1970