EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-10491

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr15:102486170-102489290

Target genes

Number: 12
Name	Ensembl ID

Zfp740	ENSMUSG00000046897
Pfdn5	ENSMUSG00000001289
Sp1	ENSMUSG00000001280
Prr13	ENSMUSG00000023048
Pcbp2	ENSMUSG00000056851
Gm10337	ENSMUSG00000071586
Map3k12	ENSMUSG00000023050
Tarbp2	ENSMUSG00000023051
Npff	ENSMUSG00000023052
Atf7	ENSMUSG00000071584
Atp5g2	ENSMUSG00000062683
Calcoco1	ENSMUSG00000023055

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Atoh1	MA0461.2	chr15:102488008-102488018	AACATATGTT	+	6.02
Atoh1	MA0461.2	chr15:102488008-102488018	AACATATGTT	-	6.02
Foxd3	MA0041.1	chr15:102486223-102486235	GTTTGTTTGTTT	+	6.32
HSF2	MA0770.1	chr15:102487735-102487748	TTCTAGAACTTTT	+	6.07
IRF1	MA0050.2	chr15:102488077-102488098	AAAAAAAAAAAGAAAGAAAAT	-	6.41
Nkx3-2	MA0122.3	chr15:102489229-102489242	ATTAAGTGGTTTT	-	7.22
OLIG1	MA0826.1	chr15:102488008-102488018	AACATATGTT	+	6.02
OLIG1	MA0826.1	chr15:102488008-102488018	AACATATGTT	-	6.02
TFAP2B(var.2)	MA0812.1	chr15:102487137-102487148	AGCCTCAGGCT	+	6.02
ZNF740	MA0753.2	chr15:102488574-102488587	GTGGGGGGGGCGG	-	7.82

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_05574

chr15:102486138-102489242

E14.5_Limb

Enhancer Sequence

ATCTGGACTT TGTAGTCTAT TTAGTTACTG GAACTCATTC AATGTTTTTT TTTGTTTGTT 60
TGTTTTTTTT TTTTTTTTAG CAGGAGGGAA ATTGATCAAG TCCATGATTC CAAAGATAAT 120
TAGAAGCAGT AATGTGGACC GAAGGGAGAC ACTGGAAGTC AGAAGAAACT CTGAGGAACT 180
TCCTGATTTT TAGGAGATGG CCCAGTACCC AGTATGGTGA ATAGAACCAG GCTACCACTC 240
ATTACAGACT GAACTGCATA AGCTTCACAA CTCTTATGCT TAAGTCGCAA GTAACCCTCT 300
GTGCCTGCAA ATATGATAGT GGGGAATGTG TGGACACAGA AGCACACAGA ACAATGCCAG 360
CTGAAGGCAC AGGTCTACTG CTGTAACTAT GAGCATCATG TGTTGCTGTT CCCCAGAACA 420
GGGTAGACAA GATGGCCCAG GAGCCCCCTT ATTTGTTTCA GTTCATTGGA GTCCTGGTCT 480
CATGTATCCC AGGCTGGCTG CACACTCACA ATGCCTCCAT GGCTGGTTTT GAACTCCTGT 540
TCCTCCTGTC TCTCCTAGGA TCAGAGGCAT TTGACAGTAT GACCAGCTGT CTTCGAATCC 600
CTTTATTAGG AGACTCCTTA CAGAGCAGCC CTGACATCAT TTTGCTCTAC CAAAATGTAG 660
TTTTGGGGGA GGCCAGGGCA GTAGTGAGGT GTTCATGTTT GAGGCAGTCT ACTGTAGTGT 720
AGTCTGGCTT CAAACTCTCT GTGTAACCAG ACCTGGCCTG GAACCTCTGC TCGTCTTGCT 780
TTCTACCTCC CAAAAGCTGG AATTGCAGCC ACCCCACCAT GCCCAGTAAA AATGCAGTTT 840
CTTTTGCAAT TGAACAAGAA CTAATAGGAC CCTCAAAGAC AGGAAGGTGA AAGTCAACTT 900
AATGAACAAA CTGTATTGAG AGGAGAATCA GAAAGAAGGC AGTGACAAAG CTAGAGAATG 960
TGCCAGAAGC CTCAGGCTCC CCAGCTACTT CCTTAGGTAG AGGCTTTAAG TTGGGGGTTG 1020
TCTTCCTTCC AGCATCATAG GGAAACCCGA CAGAGGCCTC ACCAGTCTTT CCAGGCAGGG 1080
AGTTCCTTGC CAAAGCAAAC ACTCCCAGTT CTCCGATTGT GCTCAGGCCG GGGTAGGGGA 1140
AAACAAAGAT CTCTTTCTCT TCTTCCCCAG TGCTATAGCT GCAGCCAAAG GCGGTGTTTA 1200
CACAATCTTC CCCAGTGAGG AATCTGTTCC TTTCCTCTCT AGGTTGCAGC TGGAAAAGAT 1260
TGAGTTCCTC CTTGCTGTTC CTTATTCCAG AGTCTCTGGG CAGGAAAGGT GCCCACTTCT 1320
TGACCTTCCC ACCCTATGCA CTCAGAAGTA AACTCTAGGG ACAGGACAGG GGAGTTTGAC 1380
AGCCTATCAG GCTGGGAATG GGAGCAGAGC TCAGAAGCCC AGCTTCTGTC CCAGCTTCTG 1440
ATTCTCTTCA TTCTCCTCCA TTTCCTACAT CCGAGATACA TTTCTACAAG AGAGTCAAAT 1500
GATCAAGTCC CAGGGCAGAC TGGATTATTC TGAAAAGATG ATAGCAGGTT AGTAGGTAAA 1560
GTGCTTTCTA GAACTTTTCC TTTCACCTTC AGTGTATTAT TAGCTAGATC TAGCAGGGCA 1620
AGCGTCTCTC CCATATCCCC TAAACAAAAG CAAGAAGGGG AAAGAGAGTG GTAGAGTCTA 1680
ATTTTAGTGC TGGCAGAGAA TCCTAGTGTT AAGTTACTCT TGGTAAACTG GTAACTAAGA 1740
AGCAGCAGAG AGAAAGAGAG AGAGAGAATT TATAGTCTAG CTTTCCAACA AGTCATTTTA 1800
AAACCTAATT TTGTGCTGGG TCTGCAGCTC AATGGTAGAA CATATGTTCT AGCCTGGTGA 1860
TACCTTGGGT TCAACCCCCA GAGCCAAAAT TAAAGCAAAG CAAAAAAAAA AAAAAAAAGA 1920
AAGAAAATCA GATTAAAGCT GTGCTAATTT CACTTATTCT GTGGCGTCTC AGGGAGGCAG 1980
ATGCAACCTC ATTTCCCAAG GGAAGGAACA CGCAGCCCAG GAAGAGAACA CAAAGCTCGG 2040
TGAGTAACTG GAGCCCCAGA TTCTGGATCT CTCAATCCAT ATTCCACAGG GTCAAACTGT 2100
TTCCCGAAAG CAGCAGGAGT CTTTTATGGT TTTAGGTTTT TGTGGTTCTA GGGATTGAAC 2160
CCGGGGCCTG TTTGTGCTGT ATAAGCATTC CACCACTAGA GAACATCTCT GGCCCTTGAG 2220
TCTTTTGTAC TGAGTAAACT TTCCCTGCTG TAAAGTTTTT CCCTGCCTCA AATCCCTATT 2280
GACTGTTGCC CTGTTGCTAA GGGAGCCAGG CTAGATGTTT ATTACTCTGC TGCTATGTTT 2340
TGGAAACTTG AAGTTACTGC TTCAGGTGTT GGGAGATGTG GATAGAGAAG CCATAGGGAA 2400
GGGGGTGGGG GGGGCGGCGG CACAAGTCTG CTTAACTCAG AAACCATTCC TTCACATTAT 2460
ACAAACACCT CACTCCAGCC AACTTCCCCA CCCCCACCTC AGCAAGATGT GCAGAGAGAG 2520
TCTTTCTGTA AAAGCAGCTT TGCAGTTCCT GGAAGGCCAT AATCCACCAT GGTTAAAAAT 2580
ATCTATCACA GGGCCAGAGC TGTGCCAGCT AAACTGAGCG TGCTCACAAC CCCTCAGAAA 2640
ATGACGAGTG TGGTAAAACA GACCCAGGAG CAGGGAAATG TACCTGTTTT CAAGATAGCC 2700
ACAGGGATGG TAATTTTAAA AAGTCTCCAC TGAGAAACCT CAGAAATTGT CCAGATTTCT 2760
TTCCCAGTTG TATAATGCAA GGACAGCCAT GTGCCACCAT ACCTGGACAA GTGTTGATTC 2820
TTTTTTTTTT TTTTTTTTTT TTTTGGTTTT TCGAGACAGG GTTTCTCTGT ATAGCCCTGG 2880
CTGTCCTGGA ACTCACTTTG TAGACCAGGC TGGCCTCGAA CTCAGAAATC CGCCTGCCTC 2940
TGCCTCCCGA GTGCTGGGAT TAAAGGCGTG CGCCACCACA CCCGGCAAGT GTTGATTCTT 3000
AAACACCAAA GAAAAAGGTA CCTACTTTAC ACGAATTAAA AGCATGCATG CCCTTCTGCA 3060
TTAAGTGGTT TTCCTACTCA GCTTTCTTGA GCTACATCAG ATCCAGTCAA GTGAGGAGGC 3120