EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-10406

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr15:99507000-99508360

Target genes

Number: 21
Name	Ensembl ID

Spats2	ENSMUSG00000051934
Prpf40b	ENSMUSG00000023007
Fmnl3	ENSMUSG00000023008
Tmbim6	ENSMUSG00000023010
4921518J05Rik	ENSMUSG00000089968
Nckap5l	ENSMUSG00000023009
Bcdin3d	ENSMUSG00000037525
Faim2	ENSMUSG00000023011
Aqp5	ENSMUSG00000044217
Racgap1	ENSMUSG00000023015
Accn2	ENSMUSG00000023017
Smarcd1	ENSMUSG00000023018
Gm17349	ENSMUSG00000091604
Gm17241	ENSMUSG00000092065
Gpd1	ENSMUSG00000023019
Gm16537	ENSMUSG00000089671
2310016M24Rik	ENSMUSG00000023020
Gm17058	ENSMUSG00000090406
Lass5	ENSMUSG00000023021
Gm17057	ENSMUSG00000090500
Lima1	ENSMUSG00000023022

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HSF1	MA0486.2	chr15:99508112-99508125	GAATATTCTGGAA	-	6.46
HSF2	MA0770.1	chr15:99508112-99508125	GAATATTCTGGAA	-	6.48
HSF4	MA0771.1	chr15:99508112-99508125	GAATATTCTGGAA	-	6.33
RFX5	MA0510.2	chr15:99507529-99507545	GGTTGCCAGAGCAACA	-	6.31
ZNF740	MA0753.2	chr15:99507261-99507274	CCCCCCCCCCCCC	+	6.03

Enhancer Sequence

TAGCGCCCCC CACCCCCCAG AGCTAGGATC ATAAGTGTGT GTGTCTCGGC AGTCTGCGGA 60
GCAGGGAGTC TTAATGGAGG GCCAAGCCTT TGCTCTGTGT TTGTGGATAC TGTGTGCATG 120
GGCATATGTG GACCTCTTTG TGTGTTTTCC AAAGGCAGGC TTCACATGAA CAGCAAATGC 180
TCTGTTCATG AGGACTGTTC AGGAAGGCAC ACAGCGCAAG GCTACTCTTG TGCCCAAAGA 240
GCCCAGCTCC CCCATAAGCC TCCCCCCCCC CCCCAGCAAG TGGATTGCTG GTCACAATGT 300
GAGGCCTGGG AGGATAGGGG CAGAGTAGGG CCTGAACCAA GTTGGGAGAA ATTATTTTGA 360
AAATCATTTG GGATTGAGAA AGTCCCAAAT AGCACTAGGG GCTATCCCTA GGCAATCCAG 420
TTGGGTAGAT ATCAGTAGCT CCCTTCTGAG CAGCCAAGAA AGCAAGGAAG GCCCAAGACA 480
AGGCCATCTT CTTTCCTGGC CGGCTCCCTT CCTTCCCAGT GGGGTGCTCG GTTGCCAGAG 540
CAACAAAGTC TGAAGCTCCC ATCTCCTTCC CCACCTTAAG GGCAGCCAGG CCAAGGCAGG 600
GCAGGGGGTT CCGTGTGGGT GGGGGGCTGG GGGACTCAGC TGCTGCTAGT CCCTGGGCGG 660
GGGCTGGGGA GTGAGCACAG TCACAGCTGG TGGCAGCCTC CAGCTGCACC TTATCCATCC 720
CTGGCAGTGG GAGCAGGATG TGGCTGGAAT GCTGAGCGGC ACCGACGGGA GGAGGGAGGG 780
GGCCTGCAGA TGGTTGCCCA ATCCGCCCAA TGCCAGCCCC TCCAGCTGAG ACCCGGAGCC 840
TTTGCCTAGG GAGAAAGAAG CAGGGATTCA TGTGTGGGCC TTGGGAGAGA AAGAAGAAAC 900
AGACAGTGGG TGTCCTAGAG GTAGGGATGA GGTAGGGGTG CGGTAGGAGC GGTAATCTTA 960
AATAGGGCTA GACACACAGG GCAGGAATCT GTGGAGTGCC CACAAGATCA CTCTAGATCC 1020
TGAAGCAGGG ACAACCCTCT AATAAAGGGG AGGAGTGAAG GAGGTAGGCC TAGAAGGGGA 1080
CAGGCCTTCC TCAGGGTTCT GAAGGGAGAC AAGAATATTC TGGAACACCG AGGGGAGGGA 1140
GGTGCTAATC TAAGAGGAGG TGAGATCCCA GAGCTCAGAC TGGGGACAAA GAGGTCATCC 1200
AAAGCCACCA GAGGCCTAGT GGCGGCATAG CAGAGTGATG GAACACTTGG TTGGCAAGAG 1260
GGAGGTATTA GGTCCAGCGA CAAAAAGCAT ACATTTTAAA AATAAGTAAA TCACGATTTA 1320
ATAAGTAAAA ATTTTAAAAC GGGGCTGGAG AGATGGCTCA 1360