EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-10013

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr15:79633500-79634400

Target genes

Number: 16
Name	Ensembl ID

Csnk1e	ENSMUSG00000022433
Kdelr3	ENSMUSG00000010830
Ddx17	ENSMUSG00000055065
4933432B09Rik	ENSMUSG00000042564
Cby1	ENSMUSG00000022428
Tomm22	ENSMUSG00000022427
Josd1	ENSMUSG00000022426
Gtpbp1	ENSMUSG00000042535
Sun2	ENSMUSG00000042524
Gm16576	ENSMUSG00000087543
Dnalc4	ENSMUSG00000022420
Nptxr	ENSMUSG00000022421
Npcd	ENSMUSG00000089837
Cbx6	ENSMUSG00000089715
Apobec3	ENSMUSG00000009585
Mgat3	ENSMUSG00000042428

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1	MA0154.3	chr15:79633883-79633897	ACTCCCCGGGGACT	+	6.02
Klf12	MA0742.1	chr15:79633999-79634014	AAGCTGGGCGTGGCC	-	6.41

Enhancer Sequence

GACTTCATGG TGGTCTGCTG GGATGGAGCC TACAACCTTC CCACAGGTAT CTCCTCAGCT 60
TGAACTTGGA GCCCTATACA TGCTCTCTCT GCCCATTTAA TTTGTCCATG CTTTCACTTC 120
ACCCTTGCCT TGCCCAGCTA CAGCCTGGGG GAGGAGGCTG GGGCCACAGC ATCAGCCCTA 180
TCTCGCCCCT CCTTCGAGGA TTTATTCCGT GTCTGGAAAT CAGTCCATGT CTGGGAATGG 240
CCAAGGCTTT CCTGTCTGTT TGTCCTGCTC AATCTATCTT ATCTATTTGT CCCCAGACTG 300
GGAATTTGTA ACAGAGAGGA AAGGGACCAT AGGCATAATC AGTCAATGCC TTAGCATCAC 360
ACACAAACCC GAGAAGGGTC CCTACTCCCC GGGGACTCCT TGTATCTGAC CTGGAAAAGG 420
AGGCGGAGGG AGCTAAGTAC ACCCCTATTG AGGAGTCATC CGCTGATTTA CCCCAAGAGT 480
TCAGAGCTTC AGGTACATAA AGCTGGGCGT GGCCCGGGGA TGAGAGGTGA TGCAGGCGTG 540
CAGGTTGGTG CTAATGAGGC ACTCTTGGGC TTGCCAAGAC AGCTAACGGT ACTCCTAAAG 600
GTAGTGAGTA CGGGGTGGGA GCTGCTCTAG GTTCCCGAGG AGAGCATCTA AGGAGACCAT 660
GTGCCAAACA TCCCCACACC TGCATCTCAA TCAATTTTCA CTACAAGTGG ACGCCGTTCT 720
CCCATTCTCG TGCCCCGATC ACCGTGCCAG GTTCCCACCG GCGATTCGGA CCAGAACACT 780
TCCATGGTGC CTGCCAGGGG CATGCTTCAG GTGACCCGAC CGCAGCTCCA GGGACCCGGG 840
ACCCCCGCGC CGCAGGCTGA GCAGGGCCCC TCCACCCCGT GTCCCCCGAC GGCGCACCAC 900