EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-08823

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr14:58617390-58617860

Target genes

Number: 9
Name	Ensembl ID

Ift88	ENSMUSG00000040040
N6amt2	ENSMUSG00000021951
Xpo4	ENSMUSG00000021952
SNORA65	ENSMUSG00000064525
Sap18	ENSMUSG00000021963
F630043A04Rik	ENSMUSG00000021965
Mrp63	ENSMUSG00000021967
U1	ENSMUSG00000065374
Zdhhc20	ENSMUSG00000021969

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr14:58617713-58617728	CCAGCCACGCCCACA	+	6.21
SP3	MA0746.2	chr14:58617715-58617728	AGCCACGCCCACA	+	6.37
SP4	MA0685.1	chr14:58617713-58617730	CCAGCCACGCCCACACG	+	6.11
SP8	MA0747.1	chr14:58617716-58617728	GCCACGCCCACA	+	6.22
TFAP4	MA0691.1	chr14:58617519-58617529	ATCAGCTGTT	-	6.02
Tcf21	MA0832.1	chr14:58617482-58617496	GTAACAGCTGTCAT	+	6.06

Enhancer Sequence

TACTTAACAT TTGCATCCTG ACAGCTCAGG TTTAGGAAAA CTTGTTTTGC CGCGTAGGCG 60
GGGTCCACTA AAACATTACG GTTTCGACTT ATGTAACAGC TGTCATTGGA ATTGATAAAA 120
TCTGCAACTA TCAGCTGTTT AACTTTTAGA GTTGATATTC TCTAGACTGG GGGGGTGTGT 180
GGCTCACACA GTAGGTCGAC GCCACCCTTT TCAACAAAGA AGCGACCAGG GAACTCTTTA 240
ACGATGCAGG CTAACTAAGG GGTGCCCAGC CCCCGCAAAC GTCAAGGACC CTTCTCCATC 300
CACCAGGTGG GCAGAGGCGT GCCCCAGCCA CGCCCACACG CATCCCGGGC GGGGCCTCCC 360
GCCGCCTCCT CCCGGAACCC CCCAGGCCCT CCAGGCTCGT GCCAGGCGCC TAGGGTCTCC 420
TGTGCCTCCG CCCCCCTCCC AGGGGTGCCT GAGGGCGGGG CCGGGCTGAG 470