EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-08761

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr14:55727230-55727780

Target genes

Number: 16
Name	Ensembl ID

Prmt5	ENSMUSG00000023110
Psmb5	ENSMUSG00000022193
1700123O20Rik	ENSMUSG00000040822
Ppp1r3e	ENSMUSG00000093691
Bcl2l2	ENSMUSG00000089682
Pabpn1	ENSMUSG00000022194
Slc22a17	ENSMUSG00000022199
Efs	ENSMUSG00000022203
Cmtm5	ENSMUSG00000040759
Ngdn	ENSMUSG00000022204
Gm10364	ENSMUSG00000072492
RP23	ENSMUSG00000093452
Zfhx2	ENSMUSG00000040721
Thtpa	ENSMUSG00000045691
Ap1g2	ENSMUSG00000040701
Jph4	ENSMUSG00000022208

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr14:55727443-55727463	CACCCACCCACCACCACCAC	+	6.17
RREB1	MA0073.1	chr14:55727446-55727466	CCACCCACCACCACCACCGC	+	6.97
RREB1	MA0073.1	chr14:55727439-55727459	CCTCCACCCACCCACCACCA	+	7.02
ZNF263	MA0528.1	chr14:55727567-55727588	GAGGGAGGAAGGGGTGAGGGA	+	7.14
ZNF263	MA0528.1	chr14:55727570-55727591	GGAGGAAGGGGTGAGGGAGGA	+	7.43

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_11129	chr14:55726530-55727609	Olfactory_bulb
mSE_11129	chr14:55727624-55729886	Olfactory_bulb

Enhancer Sequence

CCCTAAAGAG ACAGAGAGTG AAGCAGATTC AGTCCCGGAA GGCAAGCATA GGTCCCACCT 60
CCCTGCTCTG GCTTTATCAG CAAAGCTGAA GGGTCCCAGA CACCTCCCCA CACAGGTGAG 120
AGCAGAGGAA CACACCCTTG TTTCAGGCTC TGAAGGACCT CGCTTCTATG CAGGGCCCTG 180
CCCTCATACT CTGAAGATAG CAGGCAGTGC CTCCACCCAC CCACCACCAC CACCGCCGCC 240
GCTCTCCCCA TCCCTCAGTG TATCATGTGG GCAAGGCAGA AGGTGCCTGG CCTTAGCAGC 300
AGACATTGGC AGCAGCAGCC AGTACTGCAG TAAGGCAGAG GGAGGAAGGG GTGAGGGAGG 360
ATGTGGTTGC TAGGAGATGG GAGAAGGCCT GGAATCCAAT CAGAGCAGAG GGTTCTGGAG 420
GAAAAACTCC ACCTCTCTCG ATTTTCTGTC TGCACCCCCC CCCCCTTTCT CAGGAGAGGG 480
AGGGAGAGTG AGGGTTGGGA GGAACAATTT TTTCCTATTT CTGGGCACCA AAGAGAGAAA 540
GTATGGAGGT 550