EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-06865

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr12:109727800-109728360

Target genes

Number: 13
Name	Ensembl ID

Setd3	ENSMUSG00000056770
Ccnk	ENSMUSG00000021258
Ccdc85c	ENSMUSG00000084883
Hhipl1	ENSMUSG00000021260
Cyp46a1	ENSMUSG00000021259
Eml1	ENSMUSG00000058070
Evl	ENSMUSG00000021262
Gm16596	ENSMUSG00000087576
Degs2	ENSMUSG00000021263
Yy1	ENSMUSG00000021264
Slc25a29	ENSMUSG00000021265
Slc25a47	ENSMUSG00000048856
Wars	ENSMUSG00000021266

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

POU1F1	MA0784.1	chr12:109728081-109728095	CTTATGCTAATGAG	+	6.46
POU3F1	MA0786.1	chr12:109728082-109728094	TTATGCTAATGA	+	6.22
POU3F2	MA0787.1	chr12:109728082-109728094	TTATGCTAATGA	+	6.44
POU3F3	MA0788.1	chr12:109728070-109728083	ATTATGCTAATCT	+	6.01

Enhancer Sequence

CCCGGGTTCA ATTCCCAGAA CCTGTATGGC AGCTCTCAAC AGCCTGTAAC TGCAGTTCCA 60
GGAGCTTTGA CACCCTCTAC CTGGGCCCTG CACACACGTG GTGCACAGAC ATGCATACAG 120
GCAAGACATC CATACACATA GAGTAAAACA ATGTTTAAAA ATACTGACAG CTCTTTATAT 180
TGTGTGGTAA ATTGAATCCA TGGTCCACTG ACAATTTCAG AAGCCGTGGA CTCATCTTCT 240
TCTCAGACTA TGAGTGCTTC TTAGGGGAAG ATTATGCTAA TCTTATGCTA ATGAGGTGGT 300
GAGATCATGG CAGTGAGGCC AGGTGGCCAC AGAGTGTGCC CACCCCAAGG CTGCTCTGAA 360
TGGAATTCAG GCCGAGGTTG GTGCTGACCT GAAATGTCTA TGTTTTGGCA GGTCCTAGGA 420
ACATCTGATT TCTATCAGGA ATTTCCAGAA AGAATCTACA CTGTGTAAAG ACCAGATCTG 480
TCTTACCCTT TAAATCCCAT GGCTTTGCTT AATGTACTTG GTAAATATTT CCATGAAAGA 540
TATTTACAAA GGGATTTTTT 560