EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-06843

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr12:109445430-109446040

Target genes

Number: 9
Name	Ensembl ID

Bcl11b	ENSMUSG00000048251
Setd3	ENSMUSG00000056770
Ccnk	ENSMUSG00000021258
Ccdc85c	ENSMUSG00000084883
Hhipl1	ENSMUSG00000021260
Cyp46a1	ENSMUSG00000021259
Eml1	ENSMUSG00000058070
Evl	ENSMUSG00000021262
Gm16596	ENSMUSG00000087576

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TFAP2A	MA0003.3	chr12:109445839-109445850	CGCCTCAGGCA	+	6.62
TFAP2B(var.2)	MA0812.1	chr12:109445839-109445850	CGCCTCAGGCA	+	6.32
TFAP2C(var.2)	MA0814.1	chr12:109445839-109445850	CGCCTCAGGCA	+	6.14

Enhancer Sequence

CTGAAGAGAA AAAGCAAACG GTCACGGGGA GGCCAGCAGA GAGCTACCAA GGGAACTGGA 60
GAGGCTGGGC AGGGGTGTCA GGTGGGCTTG CTTCAGGCGC CAACAGAGGA TGTGACCGAC 120
AGCCTGTGCC CATCCACGTT GGACACGGCA GTCACTGCCA GCTCCCTCTG TGACTGAGTG 180
TCCCTGCACA AGGGTGGGTG AGGTCCATGG TATACACACA AAGGAAACGG GGAGAGCCCT 240
GGTGCGTGGT TGAGCTCTAG ACACCAGAGT CCTGAAGCCT GCACGCTTGT ACCTAGAGGC 300
ATGAGGCTGG CCTGGACCTT CCATTCCAGA GTCACTCCCA ACCTGGGCCT CTCTTTGGCC 360
TGAGGGAAAC ACTTGCCCTC TGATACTGGG TCAGTTCCCT CAGCAGCAAC GCCTCAGGCA 420
GAGCACACAA CTGACGAGCC CAAGACTACA TTCAGCCCAA GTCCCAGGGG CTCCAGGCAA 480
CTCTGTGTCT CCAGACGCCA AGGGGAAGGG ACACATCGTC TCCCAAACCC CCAGCTCAAG 540
TGGCCCAAGC TTGGAGATAG CACCTGTGGG TCCCCCATCC TGTGCTCAGG AGGAGACAAA 600
TGGCACGTTT 610