EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-06744

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr12:101519030-101521830

Target genes

Number: 6
Name	Ensembl ID

Tdp1	ENSMUSG00000021177
Psmc1	ENSMUSG00000021178
BC002230	ENSMUSG00000021179
Gm10433	ENSMUSG00000072884
Calm1	ENSMUSG00000001175
Gm17302	ENSMUSG00000091093

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR2	MA0258.2	chr12:101519579-101519594	AAGGCAGGGTGACCC	-	6.06
HNF4G	MA0484.1	chr12:101519912-101519927	AGTGGTCAAAGTTCA	+	6.06
Klf1	MA0493.1	chr12:101521675-101521686	GGCCACACCCA	+	6.62
NFIC	MA0161.2	chr12:101519984-101519995	TGTGCCAAGTA	-	6.32
NR2C2	MA0504.1	chr12:101521640-101521655	TGACCTCTGACCTCT	-	8.73
Nr2f6	MA0677.1	chr12:101521640-101521654	TGACCTCTGACCTC	-	7.42
RXRB	MA0855.1	chr12:101521640-101521654	TGACCTCTGACCTC	-	6.84
RXRG	MA0856.1	chr12:101521640-101521654	TGACCTCTGACCTC	-	6.91
Rxra	MA0512.2	chr12:101521640-101521654	TGACCTCTGACCTC	-	6.88
ZNF740	MA0753.2	chr12:101521207-101521220	CCCCCCCCCCCCC	+	6.03

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03996	chr12:101520208-101521717	Cortex
mSE_07443	chr12:101518812-101523044	Intestine

Enhancer Sequence

CAACAATTCA TAAGATGTTC TATTTATCAA CCTGGAAGCT CAGAGAGCTT GTATACCCAA 60
TGTCACATGG CTAGCAGACA GCAAGGTGGG AAGACACCTG TCTTCCCAGA GGCAGCTGCT 120
ATAAATGAAT TACAGAATGC ATCCTTGGGT CCACCCCGAC ATGTTATCCC AACAACTCCT 180
CCACATACTA TAGAGCAGAC ACACATGCTT CAGCTTCAGT GGTAAATGGG ACAATAATGG 240
GGACAGTGGC AAGGGGACCC TTGGCTGAGA GACCTGGCAT CCAGGTCTTC TCCCTGCCTG 300
CTGCCTATCA TGTCTGGAGC AACATGCTGA AGTCTGGCAG GATTGGAACA GGGCCAGACA 360
GGAGCCTGCA GCTACCAGGA TTGGCTCTAC CAGAGTGACA GCCTTATGAT ATGTTTTCCC 420
CAGGTAAAGG AGGACCTATG TGCCCCTGAA CTTCCTGTCA GGAAGAGAGC CACAGCTGGC 480
TGCCTTAGAC AGCAGTGGGC CAGGATCCCA GAAACCTAGG GTTTGGCCCT GAGCTGTGGG 540
CTATTTTCCA AGGCAGGGTG ACCCTAGGGT CAGGAGGCCT CCCCAGGATG GCCTGCCCCC 600
ACCTTTGAGG AAATTCACAC TGTGGCTAGG TCTCCAAAGG ATTCCCTGCC GTGGTGTGAC 660
CGGGCCAAGG TACACAGAAC ATTTGTTTGT GGAGTCCAGG CTTCTCGGCA GAAGGGCAGG 720
GTGGGGCTCT AACCAGGAGA GGCACCTGCC TGGGTCTTGG ACACACTCAA CAACCCATTT 780
CTGAGTCAGA GGAGCCTCCA CTCATTGCTC CTTGGTCACC AAGGTGGGAC AGGCAGGGCC 840
TAGGGCATGG TCTGCCCTCT CTGTGGAGGA AGGGAGCCCA GGAGTGGTCA AAGTTCACAC 900
AGGAATGCTG GCTGCTTGCT ACTCTGGGCT GGGCCAATTA CCAGAGGCCT CTGGTGTGCC 960
AAGTACCTCA AGGTAGCCTC TGTCAGGCTT TCCAAAGAAA GTTACAGCCT CTGTCCAGCA 1020
ATGCTGAGCA GTCTGCGGCT GACACGGATG GTCCCCTCAT CAGTTCTCTA AATCCTTCAG 1080
CTGGCTTGTG GCTACCACCA AACTATTGCT CCCAGGGCTT CAGAGAAGCA ATGTGTTCAT 1140
TGCAAGCCTT AAGAGATGCC AGCAGGCTAA CCTAGCCCCA TCTTGTTGGC CTTTGTTAAG 1200
GAAGGTTCTG AGAACTTGGA AACTAGCATT GCTAGGCTGG TTCTCCAGCT CCAGACGCTG 1260
GCACTAGGAC CTGTTGGGAG GAGGTAGGTT GGGCAAACCA CTCAGTCCTT AACTTGGGGG 1320
GGCGGGGGGC AGTAGGGGAC TTAGCCAAAT AGTTAGCAAA TGAGGGACAT GACGGGCCTC 1380
CGCCTCCAAA TCACTCTGGG CAGAGGCCAG ACTTGGGCTG CCAGGCTTAT CCTAGTCTGC 1440
CTTTGAGGAG TCAGGATCCC CCTGTAGTCT CAGTTTTACA ACATAAACCT CAGGTTAAAC 1500
AGAGAGACCT TTCAGGTCTA CTCCTGGTCC ATCCCCTGCA GGGCCCTAGG GGAAGCCTCT 1560
GGGCCCCGGG GGAAGCCATC ACGTGGGGGA ATCACCTAGC AGGGCCTGGG CTCAGCAGCT 1620
CAGGAAGGAA GAGAAGGCTC TTTAAGTTGT CATAACAGAG CAGGCCTCCA GGCACCTCCT 1680
GTTTACCCAG GCTGAGCAAA TACAGCCAGG CCCTAGCAAC AGGCACAAAG GGGCCCTTGT 1740
GCCTCTGTTC CCTGGGCTCC CTCTCCAGCC CAGGCCAGCT GGGAGCTCTC TGAGAGGCAG 1800
GGGACTTAGC CTGGCAGGTG GGAATGGGGA GAGTCAGAAC CCACTCTGGA TTTGGGGTGA 1860
GGAATCAGGT CTTTAGACAC TCTGCCCTGT GCAGGAAGGG AATCCCCCTT CCTTCAGATC 1920
AGCAAACTGA GGCTCAGAGA GAAGCCTGGC AGGGGCTTGT CAGTGTGAGA TGGAGCATGT 1980
GAATCTCAGA CCAATGAGGC AGTATTGTCC AAGAGACCTG CATTCAGCAG CGTGTTGCTG 2040
TCTGCAGTCA GGAGTTCCTC GCCATGTGAA CCTCATGAGA GAAGAGCTGT GTGAGTGAGC 2100
ATTTTGCCTG GTAAATTCTA AGCCCTGACC CAGACCGGAA CAGACAGGAG GCAAGAGTCA 2160
AGAGGGAGTT AGGAGCACCC CCCCCCCCCC GTGGCACTCC CTCAGCCCAT TTGAGAATGT 2220
GGGGGTGTCT CCAGTGGCCC ACCTCCCTGT GGCACCCACA CACCAAGTGG AGGTGCCCAC 2280
CATAGGAACG AGGGGCTAGC ATGTGATAGG CTGTTATGGA TTGCTACAAG GGTGAATGCA 2340
GACGTTAAAA AAAAGAAAAA AAGCCAAGAC CCAGGAGATG GCTCAGGAGG TTAAGGGGCT 2400
AGCCTAGCCT ACAACCATGA GGACATGAGT TTGATCCTCA GTGCCCATAC AGGACTCAGT 2460
GTGGTAGTGT ACTCTTGAAA TCCCAGCTCT GGGGAGGCAA AGACAAGAGG ATCCTTGTGG 2520
CTCTTCAGTC AGTCAGCCAC AATGAACCAG TCAGTTTGGG GCTCCAGTGA GAGATCTTGT 2580
CCCTGAAAAT AAAGGGACTG TTTCTGAAGT TGACCTCTGA CCTCTGTAAT CACTTTCATC 2640
TGCATGGCCA CACCCACACG CCTCCACACA TAATAGTTAA AAAAAAAAAA AAAAGAAAAA 2700
AAAAAGAAGC TGGGTGGCCA CACCTTTAGT CCCAGCAGAG CCACTGGGAG GAAGAGGCAG 2760
GAGAAGTTGC AGGTTCCAGG CCAGCCTGGT CTACATAGTG 2800