EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-06584

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr12:86645710-86646410

Target genes

Number: 12
Name	Ensembl ID

Gm17193	ENSMUSG00000079645
Fcf1	ENSMUSG00000021243
1110018G07Rik	ENSMUSG00000042350
Ylpm1	ENSMUSG00000021244
Prox2	ENSMUSG00000042320
Dlst	ENSMUSG00000004789
Eif2b2	ENSMUSG00000004788
Mlh3	ENSMUSG00000021245
Acyp1	ENSMUSG00000008822
Fam164c	ENSMUSG00000045064
Nek9	ENSMUSG00000034290
Tmed10	ENSMUSG00000021248

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr12:86646276-86646294	GGAAGAAAGGAAGAAATG	+	7.2
NR2C2	MA0504.1	chr12:86646159-86646174	AGAGGTTAAAGGTCA	+	6.64
Nr2f6	MA0677.1	chr12:86646160-86646174	GAGGTTAAAGGTCA	+	7.47
RXRB	MA0855.1	chr12:86646160-86646174	GAGGTTAAAGGTCA	+	7.04
RXRG	MA0856.1	chr12:86646160-86646174	GAGGTTAAAGGTCA	+	7.14
Rxra	MA0512.2	chr12:86646160-86646174	GAGGTTAAAGGTCA	+	7.22

Enhancer Sequence

ATTCCAAAAT ACACCAAAAT GTGAGATTGA AAGACTTCTG GGTCCCACTC ATCTGGGCAA 60
GAGACACTCA ATCTGCATCT GTGACTGCTT TGTGCTATGA CGTCAGAGCT GTAGCTGCAA 120
AGGGTTAAAC AGCCCACAAA GTCATGTGAC GATGCCGTGG CTTCTCTAGA TCTGTGGTGC 180
CCTCTGGTTT AGAACTGATT TACAGTTTCA CTTCTACCCA GGCTGGCTGT ATGCTGTTCT 240
TTCAGCAGAC TCCAGGCATT GCTTCTTACA TACAGCTCAG CTAACACTCA TGGTGCCATT 300
AAAACTGAGT TTGGAGCCTA GGAACGTGGC TATCTGTGAA GAGTTTGCTT AGCATGTAGA 360
GAACCCTGGG CTGGACCCCA CACTGCATAA CTGGGTGTGT GGCACATGTC TATATCATCA 420
TCTGGGAGGG AGATAGAGGC AGGAGTAACA GAGGTTAAAG GTCATCCTCC ATCCTTGGCT 480
GGGCTACAGA ACCTGCCCCA TAAAGAAACA AACCGTCACA ACAAAAAGAC CATTTGGAAA 540
TTCATGGTTC AGCTTAGTAC TCCTGAGGAA GAAAGGAAGA AATGACCCTC TTGTGCTGGA 600
AGGCAGAGCG GCAACTGCCA GGACAGTGCA GCACTGGCCC CGAAAGTGAG AGGACATGAT 660
GAAGCCAGGA GAGCCCAGGC ACAAACAGCC ACTGTCAGTT 700