EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-05600

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:119020200-119020590

Target genes

Number: 13
Name	Ensembl ID

Rbfox3	ENSMUSG00000025576
Cbx2	ENSMUSG00000025577
Cbx8	ENSMUSG00000025578
Gm17569	ENSMUSG00000090591
Cbx4	ENSMUSG00000039989
Gm11755	ENSMUSG00000086547
Gm17433	ENSMUSG00000091759
Tbc1d16	ENSMUSG00000039976
Ccdc40	ENSMUSG00000039963
Gaa	ENSMUSG00000025579
Eif4a3	ENSMUSG00000025580
Sgsh	ENSMUSG00000005043
A730011L01Rik	ENSMUSG00000039850

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr11:119020435-119020447	GTTTGTTTGTTT	+	6.32
ZNF263	MA0528.1	chr11:119020208-119020229	GGAGGAGGAGGTGGTGTGAGG	+	6.43

Enhancer Sequence

GGGGAGCTGG AGGAGGAGGT GGTGTGAGGA TCTCATATTT CTGTGCTATG CTATCCCAGG 60
GAAAGGATGG GGAGGGGGCG CGTAACATAC ACCCTGGGCT TAAATACGGA GGACACGATG 120
GAACACGCCC CGCGGAAACC GCGACCCAGG TGTCAGTGAA CGATGCCACT GAGAGCAGAT 180
CCCAGCACTC TTTGAGAAAA GTGATAGTCT GGGTTGAATG GGAAAGCATT TTTTTGTTTG 240
TTTGTTTGGT TGTTGTTGTT GTTTTTTTCA TGAGCAGACT CCGCGGTACC TTAATACAGG 300
TAGCAGGTTG TCAGGACAGC AGAGCTCAAG TCTCCTCCTG AGTGACTTAA GGCGACTTAC 360
CAGGCCTCTC TGAGCCTTTA CGTCTTATTT 390