EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-05526

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:116921240-116922410

Target genes

Number: 12
Name	Ensembl ID

1810032O08Rik	ENSMUSG00000020812
Mxra7	ENSMUSG00000020814
1110005A03Rik	ENSMUSG00000090266
Jmjd6	ENSMUSG00000056962
Mfsd11	ENSMUSG00000020818
Srsf2	ENSMUSG00000034120
Mgat5b	ENSMUSG00000043857
Gm11728	ENSMUSG00000086902
2810008D09Rik	ENSMUSG00000086859
SCARNA16	ENSMUSG00000088529
Sec14l1	ENSMUSG00000020823
Sept9	ENSMUSG00000059248

TF binding sites/motifs

Number: 17

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EHF	MA0598.2	chr11:116922078-116922090	CACTTCCGGGTG	-	6.18
ELF1	MA0473.2	chr11:116922078-116922090	CACTTCCGGGTG	-	6.14
ELF3	MA0640.1	chr11:116922077-116922090	TCACTTCCGGGTG	-	6.48
ELF4	MA0641.1	chr11:116922078-116922090	CACTTCCGGGTG	-	6.18
ELF5	MA0136.2	chr11:116922078-116922089	CACTTCCGGGT	-	6.32
GATA2	MA0036.3	chr11:116921688-116921699	GAAGATAAGAA	-	6.02
LHX6	MA0658.1	chr11:116921479-116921489	ACTAATTAGC	+	6.02
RREB1	MA0073.1	chr11:116922095-116922115	CGGGGGGGGGGGGGGGGGGG	-	6.07
TCF4	MA0830.1	chr11:116922041-116922051	AGCAGGTGCG	-	6.02
ZNF740	MA0753.2	chr11:116922096-116922109	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:116922097-116922110	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:116922098-116922111	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:116922099-116922112	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:116922100-116922113	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:116922101-116922114	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:116922102-116922115	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:116922105-116922118	GGGGGGGGGGTGG	-	6.44

Enhancer Sequence

CAGTCAGGAC TCCAACCTAT GCATGTTGAG TAGGAGCGGA CACATTAGCT TATACCGTTA 60
GTGACATCTT TTCCCTAAAG CCAGAAGGTG CTGTTGGAGC TGCCTCCCTC TGTCACTGCA 120
CAAGGCTCTC TGGAACCACC GAACTGGGAG AACGATGCAC CCTAGCAGCC AAGTGGCTTG 180
GAAAACGCAT TTAGGCTCAA ACAAAAGGCA CCAATTGAAC AAAGCCAGCA AGACACAGCA 240
CTAATTAGCA GCCACACTTT GTTTCTCCCC CCATCCAGCT GCCTCTGGAA TCAGAAAACA 300
ACCATTCGAG TGAAAGCCAT GAAATTAAAA TGCTTTTTAA AAAAACGGGC TAATGTTCTG 360
CGGGACCGTG TTTCCAAGAC AGCCTTTGTT CCGTCTTCCG GGCTTTCTCA TCAGCAGAAA 420
ACACTGTCTT GGATTGACAG GGGCAGGAGA AGATAAGAAG CCAGCCGCGG CCCTGAACAC 480
ATCTCTGGCA ATTTTCTCTT CTATCTTATC GAAACCTCCA AGACACGTTA TTTTCATCTG 540
ACGTGTGGTT CCAATTTGAG GAAGAAAGGA ACCTTTTATC CCTTCCATCC CCACATCTTT 600
TTTTTTTCCT CCCTCCCTCT CCCAAGTCCC GAGGGAAGCT TTGGGGGATG AACATTCTAC 660
CACTTGCCAG GGCTTTGGAA TCCCAAACTC CTGCCAACAG TGGTGTGGGG ACTGATAATC 720
CTCTTTCAAC CTGGAACGTC CAAGGTGTTA CTATAGTGCA CACCGGTGTG CCGTGTGTGG 780
GACCATCACA GCTTGATGGC AAGCAGGTGC GGAGACTCTG CCACCCACTT TCACCCTTCA 840
CTTCCGGGTG GACAGCGGGG GGGGGGGGGG GGGGGTGGCA AGAGCATTTA ACCTCTGAGC 900
AGCTGCCCTG TTCTATCTCA GGCTCTGCAG GCCACCTGGC GCTAAGGCTC AGCGGGCAAA 960
GACTTAGTGG GCAAAGATCA ATGTCTTTTT CAGGCTGCCT CCGGAGCTGT GATTAAAAAG 1020
CCCTTTCAAG GTGACGATTG ATAGCCCTAA GGCTAGACTG TCCTGCCCCT ACTGGAGGAC 1080
CTCTGGCAGG CAATCAGACA TATGACAGTG GTTCTCAGGG ACAGTCTAAA CCACTGGGAC 1140
AGCAGAGGTC CCCCAGGCTA TTTGGGCAAA 1170