EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-05016

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:98232090-98233380

Target genes

Number: 21
Name	Ensembl ID

Rpl19	ENSMUSG00000017404
Gm11632	ENSMUSG00000084896
Fbxl20	ENSMUSG00000020883
Med1	ENSMUSG00000018160
Cdk12	ENSMUSG00000003119
RP23	ENSMUSG00000093673
Neurod2	ENSMUSG00000038255
Ppp1r1b	ENSMUSG00000061718
1700003D09Rik	ENSMUSG00000085944
Stard3	ENSMUSG00000018167
Tcap	ENSMUSG00000007877
Pnmt	ENSMUSG00000038216
Pgap3	ENSMUSG00000038208
Erbb2	ENSMUSG00000062312
Gm12352	ENSMUSG00000084835
1810046J19Rik	ENSMUSG00000002580
Ormdl3	ENSMUSG00000038150
Gm12355	ENSMUSG00000078134
Thra	ENSMUSG00000058756
Msl1	ENSMUSG00000052915
Casc3	ENSMUSG00000078676

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EN2	MA0642.1	chr11:98232185-98232195	CCCAATTAGC	+	6.02
SOX10	MA0442.2	chr11:98233024-98233035	AAAACAAAGAA	+	6.62
TCF3	MA0522.2	chr11:98232536-98232546	AACACCTGCT	+	6.02

Enhancer Sequence

CTCCCACCAA CTGCCAAGAT GCTGTGTTAA TGCATGCTGG AGCTGGCCAG TCTCTGGCCT 60
TCCTTTCTCT CATGCAGGGG TCCAGGGGTC GGTGTCCCAA TTAGCTCAGC AGATTGGTGC 120
AGCAGGGACC CTAGGCATAG GACATGGGAC CCTCAGGCTC ACTTTGCCTT TGTAGTCCAG 180
TAGAGTCCCA CAGTTGCACA GGATGCTCAG GGCTAGATCA GTCCCCTCAC CCTAGAGCCT 240
TGGCTGTTTC ACCTGTGTGG AGATCCATCC TGTCCTGCTT GGGCAACAAC AGTGGGTTAG 300
CCTTGGCCAC GTGGACGCTG GGCAGCAACA GTGGGTTGGT TAGCCTTGGC GGTGGCAGGC 360
TTTGTCCCAT TTCTCTCTGC TGTGCCTCAT GGAATCGAGG GCCAGGAGGC CTGCTAGGGT 420
ATTCACTATC CAACAGTCTA TTACAGAACA CCTGCTGTGT GCCACAAGAG GTGCCAGGCT 480
CATGGGCGAC AGCAGTGACC AAGTCAGTCA AAGCCCTATG CCTACCCTTG ACACCATCCA 540
GTGGGATAGA GGGACCTGAC TGAAGACCCA AGTGTCTGTG CTTAGTCAGG ACCAGGGGGC 600
TGCCCAGCTA GAAGAAGTTG CCAGAATGCT GGCCCTGCCT CACCCCTCTG CCGGGACTTG 660
GAGCTGAGGG AGGGTAGGAG GTGGGGAGAT GGCAGGTTCC TGTCTTGGAG CAGCTTCACT 720
TGGGGCAGCT TCCCCCAGCT GCCTTGTGAA GAAGGGGTTG TTGAACATGA AGAGTTGATA 780
GTAGTTGGGG CTAGGATGGA CTGTTAGAGA GCAGGGGCCA AGCTGTCCGT CATCCCCGCA 840
CACCAAGACA CTGCTCTAGA GCCCCTCCCA GTTGCCATGG ATTAGGGGTG GAGGGGCTGG 900
CTGGCTGCTG GGAGGGAATT TGCTTTGTGC TTTGAAAACA AAGAACAGAG CCTGGGGCCC 960
TCTTCTCCTG GGGGTGGGGG CGGAGGCAGG ACTAAGGCTG TTGACAGGAC CCGAGGCTAG 1020
CCTCAGTCTG TGCAGGACAG GCTGCTTTCC CAAGATTCAG AAGCCAGTAA GTGCCCCCCT 1080
GCTTGGGGAT CCCAGAACCT ACAAGCTGCA AGACAGAGCA GGTGGTGTGT GTGTGTGTGT 1140
GTGTGTGTGT GTGTGCACTC AAGTCTTGCC AGCTAGTGAA GCCTGGTGCA TGGGGGGACT 1200
TACACAGAGC TGTGGGCCTT GGTGTAGGGC AGGGGTACCT GGGGATGATG CCATTCCTGG 1260
GACCCTGACA GCCACTTCCC TCTTCCCCCC 1290