EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-04973

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:97401430-97403600

Target genes

Number: 23
Name	Ensembl ID

Mrpl10	ENSMUSG00000001445
Kpnb1	ENSMUSG00000001440
Npepps	ENSMUSG00000001441
Mrpl45	ENSMUSG00000018882
Socs7	ENSMUSG00000038485
Arhgap23	ENSMUSG00000049807
4933428G20Rik	ENSMUSG00000047988
Gm11611	ENSMUSG00000087042
Gm11612	ENSMUSG00000086394
Srcin1	ENSMUSG00000038453
Gm11613	ENSMUSG00000085586
Mllt6	ENSMUSG00000038437
Cisd3	ENSMUSG00000078695
Pcgf2	ENSMUSG00000018537
Psmb3	ENSMUSG00000069744
Gm11614	ENSMUSG00000085145
Pip4k2b	ENSMUSG00000018547
Cwc25	ENSMUSG00000018541
Snora21	ENSMUSG00000064901
Rpl23	ENSMUSG00000071415
Lasp1	ENSMUSG00000038366
B230217C12Rik	ENSMUSG00000089676
Fbxl20	ENSMUSG00000020883

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr11:97402982-97402993	CCACACCCTCT	+	6.02
SP1	MA0079.4	chr11:97401682-97401697	ATAACCACGCCCCTT	+	6.2
SP4	MA0685.1	chr11:97401682-97401699	ATAACCACGCCCCTTCC	+	6.3
Stat6	MA0520.1	chr11:97403005-97403020	CACTTCCAGAGAAGT	+	7
ZNF263	MA0528.1	chr11:97401511-97401532	GGAGGAGGGTGTAAGGGAGGT	+	6.17
ZNF740	MA0753.2	chr11:97401703-97401716	CCTCCCCCCCCAC	+	6.87

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_03683

chr11:97402896-97411683

Cerebellum

Enhancer Sequence

AGACAGTGTG GAGAGGTGTG GGAGGGGGTT ATGAGGGAGG TGTGGGGGAT GTGGGGAGAT 60
GTGGGGGAAG GTGGGGGCAG TGGAGGAGGG TGTAAGGGAG GTTTATAGGG TGAGAGGAGG 120
TGTTGGGGAG GCATGAAGGG TGTGGGGGAA GCAGAGGGCA CAGATGAGCT GTCTGTAAGA 180
GGAGGGTGTG AAAATCACAA TGATGGACAG ATCCTGGGGA TGGCTGACCA CAAAAACAGG 240
AACTAGGAGA AAATAACCAC GCCCCTTCCT ATACCTCCCC CCCCACCCCA CCCCGACTCC 300
TCCCTAGCCC ACGGGCATCT TTCCATTCTT TCTACCTTTA TAGAAAGCCC TAAGGAGATG 360
GAAAGTCTAT GAATACTTCT CTCTGCTCCC CAGGCCCCAC CAAAGAAGAA AGAAAGAAGA 420
CATCTAGACT AGCAGGCATG TCTAACTTCT GACATGGCAA CGCAACTGCC ATCTACCAAG 480
TTCACACTTG AGAACTAAAC AACAAAACAT CACAAAGCAA ACCTTGCAAT GTTTTAGCTA 540
AGTTCACGAT TTTGTGTTGG CCCACACTGA CAGCAACGTA CTGGTGTTAG ACATGCTGGC 600
TAAGGGAGCT GGCCAGAGAC AGAGACTGGA ACAGGAACTC AAACAGAACT TGAATACAGG 660
AGGGGGCTGC CATGGGAGGC AGTTGTTGGA CCTGTTCCAC CAAAGAGCTA ATGAGACCTG 720
GCCTCAGGCC AGGCAGAGGG AGCTAGGGCT AGGACAATCA AAGCCAAGAT CTGAGCTCTC 780
AACAGCTGTC TGCAGACTTG GGCAGAAGTA CCGGGAGCTT TCACAAACTC TTTCCAGGAT 840
TGACAGACCC TTAATAGGAA CCTTTGTGGG TAAAGCCTGG AGCTCAAGAC TTCTTATGAA 900
ACCCTAAAGC GATTCTAGCA TGCAGAGGTT AGAATCAGGT CAGCATCTGT GACTAATGAA 960
GTCAGCTACC TGGGGAAGCA CGCTAACAGA GCATACTGCC CCAACGTACA TTGCTCTCCT 1020
CTCTTCCATC TTGCGACAAC TTTGAGAAAG TCCTGATGGC ACAAGTCTGT AATCCAGCAA 1080
TTTGAGGGAC TGAGGCAGGA TCACAAATTC AAGGCCTGAC TGAGCTAGCT ACAGAGGTAG 1140
TTCAAGATCA GCCTGGACAG CTTAGTGAGA CCCTGTCTCA AAATAGAAGG TAAAAAAGGG 1200
TTGGGGTGCT GGGTGTGGTG GCACACACCT TTAACCCTAG CACTTGGGAG GAAGAGGCAG 1260
GTGGCTTTTT GTGAGTTGGA GGCCAACCTG GCCTAGGTAG TGTGTTCCAG GCTCAAAACT 1320
AAACAAGAAA AAACAAGAAC AATACCCCCC AAAAGAGTTG GTGGGGATGA CTTGGTGACA 1380
GAACACTTGC TCAAGGTCCT GGGTTCAATC CCCACTCTGG CCTCTATGAT AAAGTTGCTG 1440
TTCACTTTCC AAAGGAGAAA GAAAGGCCCA TAGGAGTATA AATGACTGCT AGAATCTTAA 1500
AGCTATTTAG GAGCGGATTA GAATTCACCA CCAGGCTATC AGACCCTCAA GCCCACACCC 1560
TCTCCTCTCT CCTGGCACTT CCAGAGAAGT GGGGTGACAG GCAGACACAG GAGTCCATGA 1620
CAGAGACACT GATTGAAAGG TTTCTTCCAG GAAAAACGAT GGCTTGCACA CAGGACACCT 1680
GGCAAGTCTG GGTGCTAGCC TACTACCCTT TCATCATGTC GGAGGCTCCA GGGGCCACAG 1740
ATCCCAGACA GTGAGCCACA GCAGAACTTG TCTCACCCAG CTCTTGGTGT GTTACAAGAA 1800
GATAGAGTGC CTAAGGGTGC TCCGCCAGGG GCACCATGGT ATCCTGGGAG TGGGAAGATA 1860
CCACTCCAGG TCTCAATAAC ACAAACTGTC CAGGAAGTAG GAAGGCACCC ATCCCCCAGG 1920
CCTGACCTCC AAGGTGAACA CCTTGAAGGG TACAGGGCAT TGCCTGGTCG TGACCATGGT 1980
AGGGAATAAG GAAGGTAACC CTGAGGCCTT CTATGGAGGG GCAATGTGAG TTCAGGGTGC 2040
AGGGGCCACA AGTAACTTGT GACTTCAGGT CCCTGCCTTG TCAGCAGATT CTAGGCTGGG 2100
AAATGTCCGG AACCTTTCTC ATTCGAAAAC ACCCCCAGTA GGCTGGGAGT GCTGGGGACC 2160
TGAGTACCTA 2170