EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-04802

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:88140290-88141480

Target genes

Number: 14
Name	Ensembl ID

Dynll2	ENSMUSG00000020483
2010015M23Rik	ENSMUSG00000091914
Srsf1	ENSMUSG00000018379
Gm11508	ENSMUSG00000086193
Gm15892	ENSMUSG00000087373
Vezf1	ENSMUSG00000018377
2210416O15Rik	ENSMUSG00000087498
Cuedc1	ENSMUSG00000018378
Mrps23	ENSMUSG00000023723
Gm11509	ENSMUSG00000081304
Mir378b	ENSMUSG00000092985
Gm15893	ENSMUSG00000085246
Gm11510	ENSMUSG00000084411
Msi2	ENSMUSG00000069769

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HSF1	MA0486.2	chr11:88140520-88140533	GAAGCTTCTAGAA	-	6.28
HSF2	MA0770.1	chr11:88140520-88140533	GAAGCTTCTAGAA	-	6.59
HSF4	MA0771.1	chr11:88140520-88140533	GAAGCTTCTAGAA	-	6.71
STAT3	MA0144.2	chr11:88141191-88141202	CTTCCCAGAAG	-	6.14
ZNF263	MA0528.1	chr11:88140932-88140953	GGAGGAGGGGGATGGAGAATA	+	6.61

Enhancer Sequence

AGAGGCAGCG CTTAGACTTG AGCCACAGGC AAGAGCCTGA GGTTGCACAG GCGTGGGTGT 60
GAAGAAGCTG CTGCTGGCAG TAGGTGTAGC CTGAGCCTCT GGACTAGGGT TTAGGAGAGA 120
GCAAACAGTT CTCTGTAAAG TGTGCCCTGG GCACACTATG GAAGTAAAGG AGGTTCTGAG 180
TGGGCACAAT CCACCTTAAA AATAAGGACC ATGGCAACAG AAGGTCACTA GAAGCTTCTA 240
GAATAGGAAG AGAAGAAAGG AATTAGGAGG TAATTGACTA TAGTGCTCCC ACTGGAGGAG 300
AGCAGGTGGC TAGTCCTGGC ATTCTCTGCC CCTCTGAAGT TAAATGGCCC GAACCTGCCC 360
CCTGCCGAGT GTCCCACACT AAAGGCTCCT CTGTCACTAT AGATCACTCC ACAGAATTCA 420
GTCTCAGCCA GCTCAGTCCC CTGGAGTGTG GCTGTCACTT GATTCCCCTG GTGGCCGGCT 480
GCCTTGAGTG CTCCTGTGGA GGGAGCAGGG TTCCAGGGAC AGCTCTGTGT GAAGCTTACA 540
TACCTCGGCT CCAAATGGCT TGCCAGCCTC CTCCCTCTGC AGAATGGCAG GCTCAGGAGC 600
TGGAAGCTGG CTCACCAAGT TGGTTCACCT TGAAGGCTCC TGGGAGGAGG GGGATGGAGA 660
ATACAAAAGG CCCCTTTGAT TCTTTGAAAG AGGGCTGGGG AGGAAGGCAG AAGACCAAGG 720
CAAGCAGTTT GTATCTTGGA GACAGCTCAG TGGAGGACTT CAGGACTTTT TTTTCCCACC 780
TATCAAAGCC TGTGGGATCT TTAGAAAACT TCCCCAGCTC AGCTACCCTG GTGCTGCAGA 840
CCCAGGCCCT CATGGAGGTC AGGCAACCAC ACCACCGATC AACACCCCAC TCCATGAAGG 900
ACTTCCCAGA AGCAGTGGTA GGGAAGACAA GGCACCTGGC TTTCAGCCCA AGAGCCGAAG 960
GTTTCTGAAG CTTTGTGACT GATGCACGGG ACAAAGTGGA ACAGGCTTGA AATCTCTTCC 1020
AACCTCAGGG AACCAAGAGA GGGGCTCAGG GATTCTGATC AGCGCTCTGC GGCCTGAAAA 1080
CCGCATAGAT GTGTCGCCTC AGTGATGGTC TGAGTTCTGT CTCCAGATAG GTCCCTCAGG 1140
GGAATTAGAT TTACCTTGAT CAACCCTTTA GCCCCTCAGT CTTTTAGACA 1190