EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-04791

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:87981810-87983060

Target genes

Number: 15
Name	Ensembl ID

Supt4h1	ENSMUSG00000020485
Mks1	ENSMUSG00000034121
Dynll2	ENSMUSG00000020483
2010015M23Rik	ENSMUSG00000091914
Srsf1	ENSMUSG00000018379
Gm11508	ENSMUSG00000086193
Gm15892	ENSMUSG00000087373
Vezf1	ENSMUSG00000018377
2210416O15Rik	ENSMUSG00000087498
Cuedc1	ENSMUSG00000018378
Mrps23	ENSMUSG00000023723
Gm11509	ENSMUSG00000081304
Mir378b	ENSMUSG00000092985
Gm11510	ENSMUSG00000084411
Msi2	ENSMUSG00000069769

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr11:87981853-87981864	TTTTATTGCTT	-	6.32
FOXB1	MA0845.1	chr11:87982893-87982904	ATATTTACATA	-	6.62
FOXC1	MA0032.2	chr11:87982893-87982904	ATATTTACATA	-	6.62
Nr5a2	MA0505.1	chr11:87982724-87982739	GAGTTCAAGGACAGC	+	7.06

Enhancer Sequence

ACCAATTCAA TCTTGGGATA AGATGGAGAA AGTCAGATTT TTTTTTTATT GCTTTGCAGT 60
GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGCAAGT CAGGGGACAA 120
TTTGTAGGAG TCAGTTGTCT CCCTACACCA TGAGGATGCC AGGGATTAAA CTCTCGCCAT 180
TGGGCTTTGT GGCAAGCACC TTTATTTACC CACTGAGCTA TCTCACTGGC TCCAGGTTTT 240
GGTTCTTTGA GACAAGCTCT CTCGTCTAAG CTGACCAAAA ACCTCAAGGA TGACCTGGAA 300
TTTCTCATCC TCTGGTGTCT GCCTCAGGAG GTGGGAGTGC TGGGCTTACA CTCCTGCCTC 360
ACCTAGTCAG GTTTTATTCT GTGGTGGGAG TTCAATTAAG GACTTCATGC ATGTGAGGCA 420
AACACATCAC CCAGTGAACT GCAGCCCCAG CCCGGGATGG AGTGCTTTCA GACATTCTTG 480
TCTCCTTTGT CTACACTACC AGTGACATCA CCTTGGTTAC CATTTCTATG CCAGGCTCTG 540
AGAGGGCCGG GTGGTGTTCT GTTGTAGATT TCAGTCCCTA ATCACACTTG TCTTAGAGTC 600
CTGTCTGTGC ACATCCTTGT GATAGCCTTG GGGACGGGCT AGGTTAACTG TGACAGGGAA 660
CTGGGTCTGA GATGGAGCAT GAACAAGACT TAGAAGTACA ATATTCCTCA CGACAGGTTT 720
GGGAAGCTCA GTATGGTGGT GCATGCCTGT AATCCCAGCC CTTGGAAGGC TCATGCAGGA 780
CTGTAGAACG CTGAGGCACC GGGATTAAGA GTTTAAGACA AGCTATGCAA TGGAGGTGCA 840
CCTTTGATCC TAGCACTCAA GAGGCAGAGG CAAGTGAATC TCTGTGAGTT GGAGGCCAGC 900
CTGGTCTACA GAGGGAGTTC AAGGACAGCC TCAGCTATAC TTTGAGTTTG AAGTCAATAT 960
GAGCTCGATG AGACCCTATC TCAAAACAAC AACAAAAAAG AAAACAAAAT AAAGAAATAG 1020
GGAAAGATTA TATATGTATA CATGTGTATG TAAGCATATA TACATACACA CACACATATA 1080
TATATATTTA CATATTAACA TGCTTATCAT GCACAAAGTT CCCGGTTCTA TCTCCAGCAT 1140
CCAAACTAGG GAAAACAGAG AGAAGCTAGG TTGCGGTTAC CCTCATTTCC TAACAGCTGA 1200
CCACCAAAGA GTTCAGGTTC GTTTGCTTCA GCTCCTGCCT CTGTCCCTCA 1250