EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-04683

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:82669500-82670140

Target genes

Number: 8
Name	Ensembl ID

Cct6b	ENSMUSG00000020698
Zfp830	ENSMUSG00000046010
Gm11423	ENSMUSG00000085175
Rffl	ENSMUSG00000020696
Rad51l3	ENSMUSG00000018841
Fndc8	ENSMUSG00000018844
Nle1	ENSMUSG00000020692
Slfn9	ENSMUSG00000069793

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr11:82670041-82670053	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr11:82670045-82670057	GTTTGTTTGTTT	+	6.32

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_06214	chr11:82668364-82670821	E14.5_Liver
mSE_11271	chr11:82670044-82672022	Placenta

Enhancer Sequence

AAATACATCA TTTTAAAGTA GCATTCCACA GGAGGAGGCC CACGTTTAAA GAAGTTTTAG 60
GCCCACATTC TATGAATGGA ATCTGTCTAT AAAGACCCAT CTGAAAAGTG TGCGCTTTCG 120
ATGAGCTGAA AGGGTGTGTG GTGACGGCGG CCTGGCGCTG GGGACTCGGC CGCTACACTC 180
AGCTGGTTCC GTTTCAATGC TGGTGGCCTC AGGCCAGTTT TTTTGTGTGT TTTCACATCT 240
GTGGAACACA GGCAATACCA GCACCTGCCA TCTTGCTGGT TGGCTGGGCT AGGGGTGGGG 300
GTGGGAGACT GAATGGGTTA ATATGGTAAA ATTCCTGGCA CACACTGAGT GGTTCAGTTT 360
TGTTCTGTTT AGTTTCTGTG GTGCAGGAAG GAGCCCAGTG CCTGGCATGT ACCAGGGAAG 420
TAAAGCGCTC TACCTCCAAA CGCCTATTTG GTCCACTGTG TTGGCGCTTT TCATTCAAGG 480
AAAAGACAGC ACAAAGAGAC ATGTCCCACA CAGCAAGAGA AACACCGGTT TGGGGTTTTT 540
GGTTTGTTTG TTTGTTTTGG CTTTGTTTTG TTTTTTTGGT TGGTTGGTTT TTCTGTTTTG 600
ATCAGTCTTA CCCAAAGTTC TCTTGTATTT TTAGGTTGGA 640