EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-04616

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:78347940-78349570

Target genes

Number: 22
Name	Ensembl ID

Mir451	ENSMUSG00000070065
Eral1	ENSMUSG00000020832
Traf4	ENSMUSG00000017386
Snord4a	ENSMUSG00000077625
Snord42b	ENSMUSG00000065676
Rab34	ENSMUSG00000002059
Supt6h	ENSMUSG00000002052
2610507B11Rik	ENSMUSG00000010277
Gm11192	ENSMUSG00000086586
Spag5	ENSMUSG00000002055
Slc46a1	ENSMUSG00000020829
Sarm1	ENSMUSG00000050132
Vtn	ENSMUSG00000017344
Sebox	ENSMUSG00000001103
Tmem199	ENSMUSG00000051232
Poldip2	ENSMUSG00000001100
Tnfaip1	ENSMUSG00000017615
Ift20	ENSMUSG00000001105
Tmem97	ENSMUSG00000037278
Gm17235	ENSMUSG00000080180
Nlk	ENSMUSG00000017376
Fam58b	ENSMUSG00000049489

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr11:78348065-78348084	TGATGCCCTCTTCTGGTCA	-	6.17
HOXA13	MA0650.2	chr11:78347940-78347951	GTTTTATGGGG	-	6.02

Enhancer Sequence

GTTTTATGGG GCTAGAGAGA TGGCTCAGCA GTTAGACGTA CTGGATGCTC TTCTAGGACC 60
TAGGTTCAAT TCCTAGCATT CATATAGTGG CTCACAACCA TCTATAACTC CAGTCGTAGG 120
AGTTCTGATG CCCTCTTCTG GTCACTGTGG GCTCCAGGCA CACATGTGGT ACACAGACAC 180
ACATGCAGGC AAAATCAGCA CACACATAAA TTGTCTAAAA GGAACACATT TTGGGGACAG 240
TAGTGACATG GCGGCGGGTA TATAGGAAGA AGAGGGAGGA TGGTCTGGCA GGAAGCCAGA 300
GAAGACAAGT GCTACATGAG AAGGAAGAGC TGGGGTTTAT GGGAATTGCA ACAGACTTTG 360
GGGTCGGGGA AGGCTTTTAG CAGGGGAGTG ATGTGATCCA AGGACAACTT GATGCTGTGT 420
GGGATGCAAA AGTACATGAA AGGAAATGGG AAAATCAGAG GAAGGACTGG TCCAGGCAAG 480
TGATGATAAA GGCTTACACC ACAGAAGCAA TGCTGTAAAC AGAAACAACA ACAACAACAA 540
CGCCCCAAAG TGGAACCAAC CTCTTTAATA CCGGAACACT CAGTCGTTTC CTGTTATTCC 600
TCATGTTTTA CAGGTAAAAC CCACAACACT GGTCCTCAAA CAAGAATTAA GTATATACAT 660
CAGCTTGCTA AACTAAAACT GACCCTGAAG AGATTTCAGT ATGTCCTTGG AATGGTCGGG 720
AGTGGGGGGC TTTCAGGAAG GTCTATATTG GTGCTATATT AAGTAGCATA TCCTTTTGAT 780
GGCTTAATTG CTTTCAGTGA TGGAACATGG AGGAAACGAG CTCCGGGAGT CTGACAGTAA 840
CACTACAATG CTAGACTGGT GAGCGACTGA CCGCCTTACC TCAAAGCGGG AAAAAAATCA 900
ACTCCTCAAC AAGTTTTAGC AAGTTCCTCA CATACTTTGT GTGCAGTCCC ATTTCCCCAG 960
AATCAAGGAA GCACATAAAC ACGTTCTGCC AAATCAAAGA AACCCAAGTG ACTAGGCTTG 1020
CCAACTGAGG AAGTCAAATC CGGAGCTAAT CTATTCTTTT CCTCCTAAGA GCTACTTTGA 1080
GTCCTAGATG ACGTCAGACC AGATTCCACC CAGACCAATT AGGTCCAAGA GTCCAATGGC 1140
AGGTGACGCC CTAGAAAGAA ATTTCTGAGA GGATGAAGTT TCCACTGATA GTTTCAGGGC 1200
TCTTTCCTCA GGACTTCGCC TGTGGATAGA GGGGTAATCC TGGGGCTGGG GAACATACAC 1260
GTGTCTCTAT GGGAACCTAA TGCGAAGCCA AGCAGAACAA AGCGCAAACG ATCACGGTAG 1320
TTCAAAGACT TGGGGTTCTA AAGGAAGGAC ACGAGGTACG GCGAGGTGGG AAGGCTGATT 1380
TTGGCAAGAA AGGTCAGAAA TCGTGGAAGC GGCTCTTATG TTTCACCCAA AGGCTCTCCA 1440
GTGGAAATGG AGAAACATCC CATGTCTCTC GTTGCAGTGT AGGCTGCTCT CCCGCCACAC 1500
CCCTCCTCTT CTGAAAAACT GAGATCCGTG GTGCCTCCCA TCCCCAGAAA AGACCTGAAC 1560
TTCATCCCCG CGCGCCATCC CGTGCCTTTT GCCCAGGACT CAGCAGAGCC TGTCCTTCCC 1620
CTCTGCACCC 1630