EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-04486

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:75433870-75434790

Target genes

Number: 14
Name	Ensembl ID

Rpa1	ENSMUSG00000000751
Smyd4	ENSMUSG00000018809
Wdr81	ENSMUSG00000045374
2210403K04Rik	ENSMUSG00000085148
Prpf8	ENSMUSG00000020850
Rilp	ENSMUSG00000038195
Scarf1	ENSMUSG00000038188
Slc43a2	ENSMUSG00000038178
Pitpna	ENSMUSG00000017781
4931413K12Rik	ENSMUSG00000085088
Inpp5k	ENSMUSG00000006127
Myo1c	ENSMUSG00000017774
Crk	ENSMUSG00000017776
Ywhae	ENSMUSG00000020849

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXA1	MA0148.4	chr11:75434415-75434431	CCTTGTTTACTTAAGG	-	7.25
FOXD2	MA0847.2	chr11:75434417-75434430	TTGTTTACTTAAG	-	7.34
FOXK1	MA0852.2	chr11:75434414-75434428	TCCTTGTTTACTTA	-	6.74
Foxd3	MA0041.1	chr11:75434759-75434771	AAACAAACAAAC	-	6.32
SOX10	MA0442.2	chr11:75434310-75434321	TTCTTTGTTTT	-	6.62

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_06717	chr11:75433057-75438579	Heart
mSE_08069	chr11:75434487-75435394	Kidney
mSE_08982	chr11:75433368-75435630	Lung
mSE_10437	chr11:75432804-75435649	Embryonic_stem_cells

Enhancer Sequence

TGGATGAGGT GAGCCGGATG CCAGGGGACT CATAAGTGTG TGACTGTCAA GGAGACTGGG 60
ACTTGGACAC ATCTAAAGGC CATCAGCCAG TTGTTCTAAG AACAAGCCTG GCTCTGTTGT 120
GGATAAGGTT ACTGCCAGGC AGTATGGGAA CTATAAGGAG AACAGTCTGT GCTCGGGAAT 180
ACAGTGTGGC TGAGGTCTTG GCACAGGCAC AGAGACAAAT ATGGTAGTCT GCACCTGATG 240
CCAAGTGAGT AATTCGCCCG CTGCAGTGAC TCTTCAGTCA GCGTGGGGGA TGGTGCTAGG 300
CCTTGGAACT TGAGGTGACC GTGGAGCCAG GCAGGTTCAG CTGATCTACC AATACACTGG 360
AGTGGACAGC CACAGCACAG CCACACACAG GCATTGCTCT GTGTGGTTGT TGTTCCAAAC 420
TATTTTGCAG GTGAGAGGAT TTCTTTGTTT TTGGTTTTTA TTTTTGTTTA GGTATTTTGG 480
TTTTGAGCTT GGCATTGATC CCAGGAGGAG AGCAGTTTGC TTTCTGAGAG CCTAAAGACC 540
CAGATCCTTG TTTACTTAAG GAATAAATAA AGTCTTCCCC CAGAAGTCCA TTTAGGAGGC 600
TGCTCAGTGA AAACCAGCAG GCACCCTCTT TGCTCTTGCT TGTGCGCTGT CTCACAGTGT 660
AAGAGGCATC TTCAGCTGAG GCAGGTGAGG CTCAGCACGG CTCTACTGCA GCCTGCAGGT 720
GACAGTCAGT CTTAAGAGCC CAGTGCTGCC GGGCGTGGTG GCGTACGCCT TTGATCCCAG 780
CACTTGGGAG GCAGAGGCAG GCAGATTTCT GATTTTGAGG CCAGCCTGGT CTACCGAGTG 840
AGTTCCAGGC CAGCCAGGGC TGCAGAGAAA CCCTGTCTCG ATAAAACAAA AACAAACAAA 900
CAAAAAAGAG CCCAGTGCTG 920