EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-04367

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:70052590-70053150

Target genes

Number: 17
Name	Ensembl ID

Mpdu1	ENSMUSG00000018761
1810027O10Rik	ENSMUSG00000070394
Neurl4	ENSMUSG00000047284
Eif5a	ENSMUSG00000078812
Ctdnep1	ENSMUSG00000018559
Rai12	ENSMUSG00000018565
Gabarap	ENSMUSG00000018567
Dvl2	ENSMUSG00000020888
Slc16a11	ENSMUSG00000040938
Slc16a13	ENSMUSG00000044367
Bcl6b	ENSMUSG00000000317
0610010K14Rik	ENSMUSG00000020831
Rnasek	ENSMUSG00000040904
Alox12	ENSMUSG00000000320
Alox12e	ENSMUSG00000018907
Pelp1	ENSMUSG00000018921
Psmb6	ENSMUSG00000018286

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXF2	MA0030.1	chr11:70052918-70052932	CTTGTTTACCTTGG	-	6.66
FOXK1	MA0852.2	chr11:70052916-70052930	CTCTTGTTTACCTT	-	6.45

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01257	chr11:70015115-70053927	Th_Cells
mSE_12789	chr11:70050049-70054133	Testis

Enhancer Sequence

GTCTAATGTT GGCCCAACAC TTGCGCCAGA GATGAACTAG AAAGGGCTAG TTGTATCTGG 60
TGGTTGTATC TGGATTCGGA CTCAGCCATG TGGAACAGGG CGTGAGGTAG GACCTTGGGA 120
AGAGTGACTG GGTATAGGGA GGTATATGGC AAACAGCTCT CCGAGGCGCG TCATTATCAT 180
GGGAGCAGAT GGAGATGAAA CACTTCATAT TTCTGGAAGT GGCGGCCTTG AGGGCCCTGG 240
GGAAGCAAGG CCTCAGCTAC CGTTTTCGGG GGCAAGCACA CTTCACCCTC GCCTCCATTC 300
AACTCACGCA AGTCTCAGGG ACCTCGCTCT TGTTTACCTT GGGGAGTCCG CAAATTTGCC 360
CGAGCTGGCT CCCATTCCCA GGGTCCTGCC CCAGCACCCT TTCGCTCCAG TTCCCCAGTT 420
GTCTGGATCT GAGTTCCGTC TCGTTTTCCA GCGGCTATTT AGTCAGCCCC TTAATCAGTC 480
TGCTGCTTCC TAAGGCTTGC GGTTCCTCGT GTCCCAGCCC TTCAACCCCA GAACCCCTCA 540
GACCCGTTCG CGGGTTAGTC 560