EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-04344

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:69726440-69726620

Target genes

Number: 26
Name	Ensembl ID

Chd3	ENSMUSG00000018474
Efnb3	ENSMUSG00000003934
Trp53	ENSMUSG00000059552
Atp1b2	ENSMUSG00000041329
Sat2	ENSMUSG00000069835
Mpdu1	ENSMUSG00000018761
Cd68	ENSMUSG00000018774
SNORA67	ENSMUSG00000065862
snoU6	ENSMUSG00000089542
Eif4a1	ENSMUSG00000059796
Senp3	ENSMUSG00000005204
Nlgn2	ENSMUSG00000051790
Plscr3	ENSMUSG00000019461
Acap1	ENSMUSG00000001588
2810408A11Rik	ENSMUSG00000018570
Neurl4	ENSMUSG00000047284
Gps2	ENSMUSG00000023170
Ybx2	ENSMUSG00000018554
Slc2a4	ENSMUSG00000018566
Ctdnep1	ENSMUSG00000018559
Rai12	ENSMUSG00000018565
Gabarap	ENSMUSG00000018567
Dvl2	ENSMUSG00000020888
Dlg4	ENSMUSG00000020886
Asgr1	ENSMUSG00000020884
Rnasek	ENSMUSG00000040904

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

STAT1	MA0137.3	chr11:69726531-69726542	TTTCCCAGAAA	-	6.02
STAT3	MA0144.2	chr11:69726531-69726542	TTTCCCAGAAA	-	6.32

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01233	chr11:69689609-69762832	Th_Cells
mSE_06261	chr11:69726092-69736700	E14.5_Liver

Enhancer Sequence

AGAGTGCTGG GGAGGAGTTA GCTGAGCAGG CCAGGGGAGG AGAGTACTAC ATACACAATA 60
GTTGGTGCTA AGCCAGTCAC GGTGAACAGT ATTTCCCAGA AAACAGCAAG GCCTGGGTGG 120
AGGGGGCAGA ATTAGCAGTC ATGGACCTTG GGAGCCTTAC TCTTCTCTCG TTTCTGCTTG 180