EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-04170

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:59952390-59953580

Target genes

Number: 18
Name	Ensembl ID

Snap47	ENSMUSG00000009894
Mprip	ENSMUSG00000005417
Gm16062	ENSMUSG00000087249
Nt5m	ENSMUSG00000032615
Cops3	ENSMUSG00000019373
1700013G23Rik	ENSMUSG00000085260
Med9	ENSMUSG00000061650
Pemt	ENSMUSG00000000301
Rai1	ENSMUSG00000062115
4930412M03Rik	ENSMUSG00000051008
Srebf1	ENSMUSG00000020538
Gm12265	ENSMUSG00000085132
Tom1l2	ENSMUSG00000000538
Lrrc48	ENSMUSG00000056598
4933439F18Rik	ENSMUSG00000018415
Atpaf2	ENSMUSG00000042709
Drg2	ENSMUSG00000020537
Alkbh5	ENSMUSG00000042650

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EGR1	MA0162.3	chr11:59952950-59952964	CCCGCCCACGCAGT	+	6.19
EGR2	MA0472.2	chr11:59952951-59952962	CCGCCCACGCA	+	6.32
EGR3	MA0732.1	chr11:59952949-59952964	CCCCGCCCACGCAGT	+	6.43
EGR4	MA0733.1	chr11:59952949-59952965	CCCCGCCCACGCAGTC	+	6.3
ZNF263	MA0528.1	chr11:59953263-59953284	CCCCCTTCCCTCCCCGCCCCC	-	6.23
ZNF263	MA0528.1	chr11:59953412-59953433	CTCCCTCTTCTCCCCTCCTCC	-	7.08

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01256

chr11:59912604-59953366

Th_Cells

Enhancer Sequence

CCCCACTCCC CTGCCAGGTC CAGGTCCAGC CTCAAAGGTC CAATCTTCTT TGTTTCATCT 60
TATTCTCTGG CCATCTTCAG GCACTACCTT GCTGCCCACC TCCAAGATAT CCTGGGCTCA 120
ACCAGTGTTG CCCCCTCAAA ACCCTGAGCC CCTGGGTCTG TGGGGTCCGT AAGTGCTAGG 180
ATCTCTGAAA TGCATCTCTG GTGCAATGAA AGGAGGCACA TCACGAAGGT CCCTACCTAC 240
TTGTCTACAC CTACACACAC ACACACACAC ACACACACAC ACACTCCCAC ACGTCATTCT 300
GTGCCCCAAC CCCAGCACTG CTTGTTCGCA CCTTAAACAG CTCTTCTGCT CCGTGGGATC 360
CTCTAGGGCC AGCTTCTGCC TGCCAGGTTG CAGACCCTCC GCTATCACAG ACAGTCTCAG 420
ATCCCTGTGT GTGGCCAGTG TACGCACAGG CGCAATGTCC ATACTTTTTC AGTCCCTTGG 480
CCCCACACAG CAGTCAGCCC AGTCACAAAC AAGCCCATAC GAATACACAG CGCCCTCGGA 540
ACACAGCCCA CGCAGGCAGC CCCGCCCACG CAGTCACACT ACCACCTATA AACAATCGCA 600
CACAAACACC ACCCCCACGC AACCACTGCA TCACTCAGTC CCGCCGAGAC CTACCGGCAT 660
GTTCAGAGGC TGGTTTCTAG TTAATCCCCT CCAACCCCCC CATCATCAGC CCGTGACATT 720
CACACGTAGG GCAGAACAGA AATTTATAGC CACACTGATA CACGGTCCTG AACGCACAGC 780
TAAGGGCTCA CCCGTGGGCT CGTAAGTCAC TAGAAAAAAT ATTAAAGCGT TCCCTCCCTT 840
CTAGCTTTGG CACGCGCGCG CGCACGCACA GCACCCCCTT CCCTCCCCGC CCCCACTCGG 900
TCTTTAGGCG CCTAGGAACC TCGCAGCAGT GACCTGGCCA CAGCGGTGAG AGCCGCGAGA 960
GCGTCTCCTT GGCGCCCCCT CCTCCTGCTC TCGCCCAGCT TACCACTCCT CCTCCCTGCC 1020
CCCTCCCTCT TCTCCCCTCC TCCGCGTCTG GGGCGCGGGC TGCGCGCAGC CAAGCCCCCT 1080
TGTCGCGTGC CCCTCCCCGC GCGCGCCCTG CGCCCGCATC GTGCTAGCCC AGTGGACGTG 1140
GCCACAAGGC CGTCTCTAAT TACCTCCTGT CCCCCCGGCG GCCAGTGAAT 1190