EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-04091

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:54537870-54539380

Target genes

Number: 8
Name	Ensembl ID

Gm12224	ENSMUSG00000085888
Rapgef6	ENSMUSG00000037533
Gm12227	ENSMUSG00000086039
Cdc42se2	ENSMUSG00000052298
Lyrm7	ENSMUSG00000020268
Hint1	ENSMUSG00000020267
Gpx3	ENSMUSG00000018339
Tnip1	ENSMUSG00000020400

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP2	MA0516.2	chr11:54538048-54538065	GGAGGGGTGGGACTTAG	-	6.18
ZNF263	MA0528.1	chr11:54538824-54538845	AGAGGAAGAGAGAGAGAGAGA	+	6.22

Enhancer Sequence

ATAAAATTAC CCTCATCATT AGCCAAGAAT ATGTGGGATT TGACCTCAAT GCTCTTGATT 60
TTAAGCACAA CTTTCTAGCT CTTGATAACA AGTTGATTAT ATTCTGATGT CATTTACTTG 120
GGTTGTCTCC AACTGCCCTC TCCACAGTGG AATGAATCTG TCATTCAGCT GGCCTGGGGG 180
AGGGGTGGGA CTTAGCTCTG GTCTGTTCAC TGCACTGACT GATGCCCTGT CTAAACCCAA 240
CTAGGCTGGG GCTTGCTTCC TAAGTTTTGA CAGACATGTT TTAGTTTTGT GATAGGGTTG 300
CATCAATACA GCTCAGGCTC ACCTAGACCT CACCGTCCTG CCTCAGTTCC TGAGTGCTGA 360
GATTACAGGT GTGGTCACTA TGCTCGAATA GAGCGCTAGC CAGTTTCCCA GTGAGCAGCC 420
AAGCAGGCAC GCTGGCTTCC CACCAGCACA CCCACCTCCT GCCTCATGAC TGCCCCTGCC 480
CTGCTCATCT GAGGTTTGCA CAGATCCTTC AGACACAAGA GCAGCCACCA GTGTAGCTGG 540
GTCACTGTCC TCACAGCAGG CTTCCCTGTG AGAGCACACA GCTCTTAAGT TTGCAGGGAA 600
CTATGAACTG TAGGAACAGA ACCTCAGGAC ACAACACCCA GGTCCATAAA ACTGCAATGT 660
TGCTGCTATT CTAGTAAGTC CTAAATCTGA CAGTGCTCAG GGCAGTTTGT CTGTCAGAAC 720
ATGGCTCTCT ATAAACACAG AGAAGTGGAG AGTTCGAATG TACAAGCCAG AAACCAACTT 780
ACCATCTTTT TATTTTTTAT TGTTGCCAAA TAAAACCCCA GAAGAGCTGG GAGGGTTTAT 840
TCCTGCTAAC TCTGCATGGT AACACAGTGC CTCTTAACCA TGTGTTCCTA GAGCTTCTGC 900
ACATGTGTTT TTGCTCGCTC TGTGTATGTG TATGTGTGTG TGTGTGAGAG AGAGAGAGGA 960
AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAATATA 1020
TCCCCACATA AAACAAACCT TCAAACTTAA AGTGCACCTC TGCACAGCAA GTGCTCAAGG 1080
CCACCTGACC TACAAGCTGC AATTCTAGAT CAGAGTTTCT TTAGTAGCAG CAGCAACAAG 1140
AGTAATAATA ATTATCACTA TTATTAGGAG GCCTGCGCCT GAGCACACAT GTGGAGGTCA 1200
GAGGATGATT CGTGGAATCT ATTCTCTCCT TCCACCTGTC TATGGGTTCT GAGGACTGAT 1260
ACCAGGTCAC TGGGCCAGCG TGGCACATAC CTTTACACAC CACACCATCT ATCTCCCTGG 1320
CCCTTATGAT GGTTTTACAA GAACTCACTC TTAGATGTTA CTGACCTGCT AAGCCTCTGT 1380
GAGCACTTGC AATGCTAGCC TCTAACACGG TTGAGTCAAC ACTTTCACCT GTGGAGACAG 1440
GTCTCATTCT ATAGGGCTGG CTGTACTGAA ACTCCCTATG TATGTATGTA TGTATGTATG 1500
TATGTATGTA 1510