EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-03664

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:6342850-6344330

Target genes

Number: 18
Name	Ensembl ID

Ykt6	ENSMUSG00000002741
Camk2b	ENSMUSG00000057897
Nudcd3	ENSMUSG00000053838
Ddx56	ENSMUSG00000004393
n	ENSMUSG00000077524
Tmed4	ENSMUSG00000004394
Ogdh	ENSMUSG00000020456
Zmiz2	ENSMUSG00000041164
Ppia	ENSMUSG00000071866
Purb	ENSMUSG00000049647
AL646020.1	ENSMUSG00000092885
Gm11973	ENSMUSG00000086839
Myo1g	ENSMUSG00000020437
Gm11974	ENSMUSG00000085156
Ccm2	ENSMUSG00000000378
Nacad	ENSMUSG00000041073
SNORA5	ENSMUSG00000064495
Ramp3	ENSMUSG00000041046

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HLF	MA0043.2	chr11:6344094-6344106	CATTACGTAACC	+	7.22
IRF1	MA0050.2	chr11:6343035-6343056	AAAAAAAAAAAGAAAGAAAGA	-	6.25
TEF	MA0843.1	chr11:6344094-6344106	CATTACGTAACC	+	6.44
ZIC1	MA0696.1	chr11:6344082-6344096	CTCAGCGGGGGGCA	-	6.41

Enhancer Sequence

TTTAAGCAAG AAGCACCTGT TGAAAGTACC TGTCAAGCCG GGCGTGGTGG CGCACACCTT 60
TAATCCTGGG AGGCAGAGGC AGGCAGATTT CTGAGTTCGA GGCCAGCCTG GTCTACAAAG 120
TGAGTTCCAG GACAGCCAGG GCTATATACA GAGAAACCCT GTCTCGAAAA ACCAAAAACC 180
GAAAAAAAAA AAAAAAGAAA GAAAGAAAAA GAAAAAAAAA AAAAACCCAA AAATAAAGTA 240
CCTATCATGT GAAAATGTAG ATGAAACACA AAGTAATAAA ACTGATGTTA CAATGGATTT 300
AGTAATAGAT TTGCTCAGGA AACATTGGCC CAAGTGAAAT TTAGCTAAAG GTGGACCGCC 360
TCTCAAACCC CTCGAAGATA AGCAGTATGC TAAGCAGGCC TGCAAATTAA AAACATGGAA 420
CTTAGGATGT TAGGAGACAA CTGTTCACCA GGATGGGCCA CCCAATCAGA CTCATTCCCG 480
TGACAAAGGA GACAGAACTG ATCTATGACC AGCAGTTAGG CCCAGATAAA GATAAACCAG 540
CTTGTAATTC TGCAAGGTAG GTATGATGAC CCTCGGTAAT AACTTTGAAA AAGAACAGTG 600
GCATACTTAA AAATACTCCT AGCCATATGT AGTAATATGT ATAAATCTAT CCACTTCAGC 660
GGTCAGACTT GCAATCTCCT GTCTCTGCTT AAATTGTTCA AAGTGTAACC TGGGACCTCA 720
AAAGAGATGT CAGGATAACA GAGTCTGTGG AATGCACACA TCTAAAATGT ACATAAATTA 780
GTAAGCTCTT CAGTTGGAGG CAGGCTCTTG CTTGAGTCTT AGCCCAGCCA GACAAGCGTC 840
AAAGAAAAGA TAAAGAGCTT TTCCTTAACT AATCTCTAAG TGCATGCAGA GAGTCCTTCT 900
TGGGAAGGCT TACTATTTCT ATAACAGCGA AAGCATATTT CAAGCAGGAT ACCGACAGAA 960
ATATAATTCC AAAAAGAGAG CGTCACTCCC CTTAATCTTG GTGAAACACA TAGGTCTCGA 1020
TTGGTTTTAG GACTTTCCCC TCAATTTCAG AATGGGGCTA AAGTTTTACT CACTTTCTTT 1080
CTTTAGAAGT CACTTTCAAC TAGATCTAAA CTACAGAATG AAAAGATACT TTAAGATGAA 1140
GCCAAGTAAA TAAACTTCTA TTCCAAAGAA TAACCGGCAA GCCGCTGACG AGGCGAGCGG 1200
TTCTGGTGGG CAGGATCAGA ACTCCTCCGA TCCTCAGCGG GGGGCATTAC GTAACCCTGA 1260
GCCGAAGCCT CAGAACTCGC AGGGCTACAG CCGGACCTCC TCTGTGCGGC GCAGCACCCG 1320
CCCCCCTGCT TCTGCCTCCC GCGTCCGGCG CGCCCCCCCA ACCCCCGGCG GAGTCCGGAA 1380
CAGCGGGCAC TCCGGCTCCG AAGCGCGACA CCGCCCACTC CCGATCCCCC AGGTGGAGCA 1440
GCCGTCCGGG GCTTCTGCGC GCCCACTCCA CGCGCGACCC 1480