EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-03632

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr11:5748680-5749900

Target genes

Number: 14
Name	Ensembl ID

Kremen1	ENSMUSG00000020393
Xbp1	ENSMUSG00000020484
Mrps24	ENSMUSG00000020477
2210015D19Rik	ENSMUSG00000083844
Urgcp	ENSMUSG00000049680
Dbnl	ENSMUSG00000020476
Pgam2	ENSMUSG00000020475
Gm11966	ENSMUSG00000080904
Polm	ENSMUSG00000020474
Aebp1	ENSMUSG00000020473
Pold2	ENSMUSG00000020471
Gck	ENSMUSG00000041798
Ykt6	ENSMUSG00000002741
Camk2b	ENSMUSG00000057897

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr11:5748682-5748694	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr11:5748686-5748698	AAACAAACAAAC	-	6.32
TEAD1	MA0090.2	chr11:5749103-5749113	ATGGAATGTG	-	6.02
TEAD4	MA0809.1	chr11:5749103-5749113	ATGGAATGTG	-	6.02
ZNF263	MA0528.1	chr11:5748772-5748793	GGGGGAGGGGAAAGAAAGGGG	+	6.81

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_09695

chr11:5748637-5750332

MEF

Enhancer Sequence

AAAAACAAAC AAACAAACAA ATAAAAAATA AAGGAACAAA CAGTAACTGC AAAATGCACA 60
GAGCACTTGG TGGTTCACGA GTGCTAATGT TGGGGGGAGG GGAAAGAAAG GGGGGAACTC 120
TTTGGTGGAA TCACATGATG TCCTCAGAGG AGAGAGTGAA TGAAACCCAG CAGAGCAGAT 180
GGTCCCTGAG TAGAATCGCA GGAGCACGCG CCCAGGCTGG CAGGCAGCTT GTGCAGATGA 240
CTGAAGTTTC CACAATAAAA TGTTTCTAAG GGTGTGCACA TCTACATAAT GAGATCAGCC 300
TGGCCAGTGC ACGCTGCCAG ACTGCTCAAA CCCTCCACAC CATGTCCTGT CAGTGGGAGT 360
GACACCAGCG CCTGCATCTT GCCAGGGAGG GACTAGAGAC AGAGAGGGCA AGTTTCTCAG 420
CTGATGGAAT GTGAAACCCC TCAGGTGTCT CAAGGTCTAA ACAAGTTCAT AAGCCTCTGG 480
AAGATTATAG TTGTTCTCTC TGGTGGGAGG GGGGGACACA GCCTGTACTT TGATAACATA 540
TACCAATAAT TTTGTTATTT GGCTTGGCAT GCTTTTTAAT TTTTCTACAC TGAGCGCATA 600
GTACTTGTGC AACAGAAGTC TTTTGAAAGA ACCATCTTCC TCAGAGTCAT AGCCAGCACT 660
GACCAGGAAG GATGCAGAGG GCCTCTGCAA AGTGGAGATG CTGAGCCCCA AGTTCCTGCC 720
TGATGAAAGG GTATACCTGA GCTAGGCACT GGCCAAGACA GAAGCATACT GCATGGGGGA 780
GAGGGGATCA ACCACTAGAG GCTCCCTGGC CCCATCCCTG CTCCCCACCA GGAAAGCACT 840
GAGCCCATGA CCACAGCCTT TCTCTGAGTC AACACGGCTG GCAGAGATCC AGGCTCTGCA 900
GGGAGGTAAG GAGGTCCCCC CCCCCATTCC TCCAGTGTTC CCACTGGCAC CAGCTATCCA 960
GAACTATTCA GGATGTGGTC ACCAGTGGCC ATTTCTATAC CCCTAGGCAT GAGCTCATTT 1020
TGGGAAGGGG CATCGGGGAG GGGTCAGGCA ATGTGGTCAC CTGCCACACA CACACACACA 1080
CACACACACA CACACACACA CACGAATTCT TCTTTCACAA CTGGTTGGGG TAAGCACATC 1140
CCCTCTCCCA CTAGAAGTCT GCTCCCCATC TCTCACCAAG ATTTTTTGTG TTTCAGTTGT 1200
CTTGGAGACA TGCTAAGTAG 1220