EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-03377

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr10:126264930-126266460

Target genes

Number: 12
Name	Ensembl ID

Xrcc6bp1	ENSMUSG00000025436
Ctdsp2	ENSMUSG00000078429
Mir26a	ENSMUSG00000065430
Mir546	ENSMUSG00000072837
Cdk4	ENSMUSG00000006728
Tspan31	ENSMUSG00000006736
Os9	ENSMUSG00000040462
Arhgef25	ENSMUSG00000019467
Dtx3	ENSMUSG00000040415
Dctn2	ENSMUSG00000025410
Mbd6	ENSMUSG00000025409
R3hdm2	ENSMUSG00000025404

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxj3	MA0851.1	chr10:126265727-126265744	GTGTTTGTTTATCTGCC	-	6.19
TCF3	MA0522.2	chr10:126265297-126265307	AGCAGGTGTT	-	6.02

Enhancer Sequence

CACATTTCTG CTACCCAAAA CTTTTTTTTT TTTTCCTTTT CTGAAACTTG GTCTCATTAT 60
GTAATCTTGA CTGGCTTGGA ACTCACTATG TAGACACACT AGGTTGGCAG TAAATTACAA 120
CACCTCTCAT AACTGAAACT CTGTATCTCT CGACCAACAT TTCCTCTTTG GCTACACCAA 180
CCCCACCCCC TCCCCCCACC CCCAGCCACC CACAGTACTG CCTCCATTAT TCACCATTAC 240
ACTCTGTTTC TGAGAGTTCT TTATGGATGC CACAAACAAA TGAGGTCATA ATGAGTACCT 300
GTCTGTCTGT GACTCTCTTA CTTCAGTTAG CACAGTATCC TCAAGGCTTA TCTATGTTAC 360
TGTAGACAGC AGGTGTTCCT TTTTATGGCT GAATAATGTT ACATTGTGTG CTTGTACCAC 420
GCTTGTCTAT TGATAGATGC TTAGCTTGAT TTTGTAGGGT GACTTTTTGT GGCTAATGCT 480
GAAGTGAACA CCGGAATACA GATCTCTCTC TTCATCCCTC CTTTGGATAA ATGCCCAGAA 540
GTGGGATTTC TGGGTCATTT GGTAGTTCTG TTTTTCGTTT TTTAGGAGCC CCTTCGCTAC 600
TCTCCAGCAT GCTGGACTAA TTTACATTCT CAGCAACAGC ATACAGATGG TCGTCCCCTT 660
TCTCCACACT CTCACAGCAC TTGCCTTTGG CTTTCCAGGA GTCGCGCTAA CAAGCATGAG 720
ATAATTCCTC ACTGTGATTC AAACTGCGCT TCCCTGGGGG TGACTAATGT TGCGATTTTT 780
CTTCATCTAT TGGTCAAGTG TTTGTTTATC TGCCTTTCAG AAATACCTAT ACAAGTCTGT 840
GGCCTTTTTC TACTAGAAAA GATAGATATT GCTGCCCTGC TAATTAAGTT CAAAGTCTAC 900
CATTGTCTGG ACAGCCTTCT GAGCTTGGCG CAATATGGAG GAAACCCTTC ACTATAGCAG 960
GGCTTCTCTG ACTTTGTCTG AGTTCGACTG CACACACACA CACACACACA CACACACACA 1020
CACACACACA CACACACCTC TACCTGAAAA ACGTCACCAT AGCCTTTGTT AAGATTAGAG 1080
GTGCAATTTC CTTTCTACCT GTTAGAACCG TTCAGCCAGC GCCTGAGATT CCTGAAATCC 1140
TTTCCCATGC TAATGAGGCA TTTTGGTATT ATAAGCCTTC AGCTAATGAC CTTTGCCCAT 1200
CCTGGATGTT CTCATCCCCA TCCCCAAAAT TGTATGAGCA TTGGATCACA CCAAGTAAAG 1260
TTGATCTGCC TCCCTGCAGC TGGTCCCAGT GGCCTATTTT CTGTGCATGC TAACAGGGCT 1320
TCCAAACACA CACACACACA CACACACACA CACACACACA CACACATCTC TGTTCCCTTT 1380
GCCTTCGTGG ACTGATATAG GCCAACAATT CCCAGGGACA GGGAGGGTCA CAGGGTATGA 1440
CTATTTTAAT TCTGATTTTG AATACACATG ATTTAAAATA AAACATTAAA GCCAGGGAGA 1500
GTGGCACTTG CCTTTAATCC AAGCATTTAG 1530