EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-02846

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr10:79846840-79849400

Target genes

Number: 33
Name	Ensembl ID

ORF61	ENSMUSG00000013858
Polr2e	ENSMUSG00000004667
Sbno2	ENSMUSG00000035673
Stk11	ENSMUSG00000003068
Midn	ENSMUSG00000035621
Cirbp	ENSMUSG00000045193
1600002K03Rik	ENSMUSG00000035595
Efna2	ENSMUSG00000003070
Mum1	ENSMUSG00000020156
Ndufs7	ENSMUSG00000020153
Gamt	ENSMUSG00000020150
Dazap1	ENSMUSG00000069565
Gm15122	ENSMUSG00000087672
Rps15	ENSMUSG00000063457
Apc2	ENSMUSG00000020135
2310011J03Rik	ENSMUSG00000020133
Reep6	ENSMUSG00000035504
Adamtsl5	ENSMUSG00000043822
AC152062.1	ENSMUSG00000084658
Mex3d	ENSMUSG00000048696
Mbd3	ENSMUSG00000035478
Uqcr11	ENSMUSG00000020163
Tcf3	ENSMUSG00000020167
Atp8b3	ENSMUSG00000003341
Rexo1	ENSMUSG00000047417
Klf16	ENSMUSG00000035397
Fam108a	ENSMUSG00000003346
Csnk1g2	ENSMUSG00000003345
Btbd2	ENSMUSG00000003344
Ap3d1	ENSMUSG00000020198
Dot1l	ENSMUSG00000061589
Mir1982	ENSMUSG00000087993
Lmnb2	ENSMUSG00000062075

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr10:79848180-79848191	GGGCGGGAAGC	+	6.02
KLF5	MA0599.1	chr10:79849025-79849035	GCCCCGCCCC	+	6.02
RREB1	MA0073.1	chr10:79849040-79849060	TATCTGTGGGTGGGTGGGGG	-	6.15
TFAP2B(var.3)	MA0813.1	chr10:79848984-79848997	TGCCCTCCGGGCA	-	6.12
TFAP2B(var.3)	MA0813.1	chr10:79848984-79848997	TGCCCTCCGGGCA	+	6.34
TFAP2C(var.3)	MA0815.1	chr10:79848984-79848997	TGCCCTCCGGGCA	-	6.46
TFAP2C(var.3)	MA0815.1	chr10:79848984-79848997	TGCCCTCCGGGCA	+	6.57

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_04752

chr10:79847293-79850195

E14.5_Brain

Enhancer Sequence

TCCAGCAGGC GGCCTCTCCC TAGCTGTGAC CTAGCCTTAG CCCCTGATGG TAGTGTTGGT 60
GGCTAGGGCC CTAAGGACCA AGAGGACACA AGGAGCAGGC AGGGCATGTG GCAAACATGG 120
CTATCTCTGC ACTCAGGAGG TTAAGACAGA ACCATCCTAA GATGGAGGTC AGCCTGGGCT 180
ACAAACAACA GAGCTGGCCT GGGGGTGTGG CTCGGGGGTG GAGCTCCTGC CTAGAATCCT 240
CCAGTAAGGT GCTGGAGGTG TGGTCCCCCC AGTGAAGGGC AGTGGCATGG CTCAAAATAC 300
CCTCCAGTCT ATTGTACATC TGAAGAAGAC TGAGGCTCAC ACAACAGGAT GGTACCAGGG 360
GATAGGCAGG CCTTGGCTCC CTGCGGCTCA GGTCAGGTAT GGAAGCCAGG TAGGGTCCAT 420
GTGTCCATGG ACGTGACCTG GCTTTTGATG GGTAACCATG AGCTCAGGGA AACACCCTGG 480
AAAAAATGGG GGAACGAACC CAGGCACACA CAGTCAAGGG AAGAGGTCAA AGGACCTGAC 540
AGAGGTGTGT CAACTCGACA CAAACCTAGG TACACTGGGG AAGAGGGACT CCCATCTGTG 600
TCCATTAGGC TGGCCTGTGG GCATGACTAT GGGGCATTTT AGTGATTCAT GATTGGTGGG 660
TGGTGCCATC CCTGGGCAAG GTGGCCCTGG GTTCTCAAAG AAAGCAGGCA GGTGGAAGAG 720
ACCATGAGGA GCAGTAGGTA GCACCCCCAA CAGCCTCTGC ATCAGCGCAG CCTCAGTCAA 780
CGGCTGTAGC TGGGAGATTA AAATAAACCT CATCCTCCCG AGCTGCTTTT GCTGTTTTAT 840
CACGGCAACA AATGGCCAAC TAGGCTAGAT GCGCTTGGGT GGGATAAGCT GGAACCACAG 900
ATGTCAGAGG CAAGGGCCCT GAGGCTGACG CCCTGTCCCT ATATCCAGGG TGCCCTCCAT 960
GTGGCTCTGA GTCCATTTAC TGAGCTGAGA CTTGCGGACC ACACCAATCC AGGGCTTATG 1020
AACATCTGCT CAGTGTCCAG GGGTCACCCC AGCACAGTGG GGGACTCAAG GCCAAGCTTG 1080
CTGTTGGCCA CCAATGGCAC CCCACATCTC AGTAACACAG CAGACTGGGA CTGAGCCCGA 1140
CGCCCCTGGA CTTGATTCTC CAAAGAGTGC TAAGCTATAC ATTTACATGG AACTGTGGTG 1200
GGCTCCGCCT CCAGAAAGAG GCAGCAGGCA GCAGGTGACT TTGAGACAAA AGATGATAAT 1260
CCTTGACTTC TTCATTTGGC CACACAGACT CTGAACAGGT CTGGAAAACT GGTCCCAGTA 1320
CAGTTACAGG GGATGGCATT GGGCGGGAAG CCAGCCCAAG GTGGCATTGA GCCTACACAA 1380
AGGGACAGCT GGCTCACAGA TGACTGTCCC CACCCTCGAG GGCCCCTAGG CCCAGCACCG 1440
CCCATTCTCG GTAGGCATGG AACGGATAAA TGACAGAAGA GCAGGGGATA CTCCTGGAAC 1500
TCGGGAAGTG GCCACGGGTG GCCTTTGCTT GTTGGAGGAT GGCAGTCACC TTTGCAATTC 1560
AAACCACTCA CATCCTCCTC CATTCCTGAG GGTCCAGGGA TGCCTGAGCC CCACCCTAAA 1620
GTTCTTAGGC TGATCCCCGA TCTTAGCTGG GATATGAGGA GTGGGCTGCT GTGGTGAGGA 1680
GGGAAGGGGA AAGTTGGGGG TCATCACTAT CCAGGCTTGT GGGTGTGTGA AGGGCCGGGC 1740
ACTGCCCACC ACAGTCCTGC CCGCCCCAGC AGCTCAAGGG CCAATGAGCA ACGGCTGGCC 1800
TGATGTCACT GTGCGAATCT CAGCCTGGCT TTCGAACAAA GAGAACAATG GGGCGGCCAA 1860
CAGAGACACT CCCCAGCTCC ACAGTGCTGC CGCAGGGACC CCCATGTCTG GGTAGATTAG 1920
ATCCCTATAC CCTGGGACCG CTGGGGGTCA GCCTGTCAAG ATGGGCGGGG TGAACCCCAT 1980
GGAGAGCTTC TACAGCCAGG AGACCCTCCT ATAAATGCCA GATTCTCAAG CTCAGGGTTC 2040
GCTGGGGGCT ATAGTCATTT TCTCAGAGGA CAGCACCTAG TCCGGACCTC CAAGCTAGAG 2100
AGCTAAGAGA GGCACCTTCT ATCTAAACTA CTATACTTCA ATCCTGCCCT CCGGGCACCC 2160
TCCCTGGGCT AGCAAGTCTA AGCTGGCCCC GCCCCATGCC TATCTGTGGG TGGGTGGGGG 2220
GCAGCCCTAG CTGCTTCTAA GGGGCCTATG TCCTAAGGTG TCCCCCAGCT ATGGCACATG 2280
GACTGTGGTT GTCCCTAGGA ACCCAGACAA AGGCCGCGGT TGTGGCCACA GCTTGGGCAG 2340
TGCCCAACTT CTGCAGCAGC CGGCAGCTTT GAACAAAGGC GCCAAGAAAT CCACCGAGGC 2400
CTAGATTCCA CACGGGGCGT GTCCCTGGGG TCTCCTGGTC ACATTCACCC TGGGCTAGAA 2460
CGGGCCACAG CTTGTCCCTT CCTCCCACCA ATACATACGT GCCCCCCTCA ATATTTATCC 2520
AGGAGAATAA GCGCGCCCCT GCACTCCTCG ACGGCAGCCA 2560