EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
MM121-02816 
Organism
Mus musculus 
Tissue/cell
NPC 
Coordinate
chr10:79613050-79614120 
Target genes
Number: 47             
NameEnsembl ID
Cdc34ENSMUSG00000020307
BsgENSMUSG00000023175
Rnf126ENSMUSG00000035890
PalmENSMUSG00000035863
Ptbp1ENSMUSG00000006498
E130317F20RikENSMUSG00000091994
Gm17134ENSMUSG00000090860
Prtn3ENSMUSG00000057729
BC005764ENSMUSG00000035835
Med16ENSMUSG00000013833
C030046I01RikENSMUSG00000035781
Arid3aENSMUSG00000019564
Wdr18ENSMUSG00000035754
Grin3bENSMUSG00000035745
ORF61ENSMUSG00000013858
Cnn2ENSMUSG00000004665
Abca7ENSMUSG00000035722
Polr2eENSMUSG00000004667
Gpx4ENSMUSG00000075706
Sbno2ENSMUSG00000035673
Stk11ENSMUSG00000003068
MidnENSMUSG00000035621
CirbpENSMUSG00000045193
1600002K03RikENSMUSG00000035595
Efna2ENSMUSG00000003070
Mum1ENSMUSG00000020156
Ndufs7ENSMUSG00000020153
Dazap1ENSMUSG00000069565
Gm15122ENSMUSG00000087672
Rps15ENSMUSG00000063457
Apc2ENSMUSG00000020135
2310011J03RikENSMUSG00000020133
Pcsk4ENSMUSG00000020131
Reep6ENSMUSG00000035504
Adamtsl5ENSMUSG00000043822
AC152062.1ENSMUSG00000084658
Mex3dENSMUSG00000048696
Mbd3ENSMUSG00000035478
Uqcr11ENSMUSG00000020163
Tcf3ENSMUSG00000020167
Rexo1ENSMUSG00000047417
Fam108aENSMUSG00000003346
Scamp4ENSMUSG00000078441
Csnk1g2ENSMUSG00000003345
Btbd2ENSMUSG00000003344
Mknk2ENSMUSG00000020190
Ap3d1ENSMUSG00000020198
TF binding sites/motifs
Number: 10             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
INSM1MA0155.1chr10:79613085-79613097CGCCCCCTGGCA-6.74
ZNF263MA0528.1chr10:79614038-79614059CAGCCCTCCTCCTCCTCCTCC-6.61
ZNF263MA0528.1chr10:79613635-79613656GGGGGAGGGGCGGAGGGGGAG+6.68
ZNF263MA0528.1chr10:79614047-79614068TCCTCCTCCTCCTCAGCCTCC-7.48
ZNF263MA0528.1chr10:79614041-79614062CCCTCCTCCTCCTCCTCCTCA-9.64
ZNF740MA0753.2chr10:79613173-79613186GGGGGGGGGGGGG-6.03
ZNF740MA0753.2chr10:79613174-79613187GGGGGGGGGGGGG-6.03
ZNF740MA0753.2chr10:79613175-79613188GGGGGGGGGGGGG-6.03
ZNF740MA0753.2chr10:79613176-79613189GGGGGGGGGGGGG-6.03
ZNF740MA0753.2chr10:79613177-79613190GGGGGGGGGGGGG-6.03
Number of super-enhancer constituents: 17             
IDCoordinateTissue/cell
mSE_01215chr10:79600012-79642628Th_Cells
mSE_03327chr10:79607740-79616359Bone_Marrow
mSE_04281chr10:79609940-79615728Cortex
mSE_04491chr10:79610081-79615737E14.5_Brain
mSE_04925chr10:79609054-79616358E14.5_Heart
mSE_05572chr10:79610136-79615658E14.5_Limb
mSE_06562chr10:79608139-79615443E14.5_Liver
mSE_06669chr10:79607860-79616365Heart
mSE_07167chr10:79607891-79615771Intestine
mSE_07999chr10:79608273-79618222Kidney
mSE_08423chr10:79608163-79617476Liver
mSE_08995chr10:79609041-79616410Lung
mSE_09402chr10:79612345-79616536MEF
mSE_11235chr10:79613176-79616463Placenta
mSE_11947chr10:79609402-79616500Spleen
mSE_12683chr10:79608824-79613183Testis
mSE_12683chr10:79613190-79615369Testis
Enhancer Sequence
AAAGACACGT AGGTAGAGCG CCGCCCCCGC CTGCGCGCCC CCTGGCACCG GGCCGCCCCC 60
TCGGGCCCGG GCCCCGGGCG GGAACAAAGA GCGCGCCGCG CGGGGAAGCA GGGGCAGCCA 120
GACGGGGGGG GGGGGGGGGG ATCGGGGGCG CGCCGCGCGC TCTCGGGCGC CCTCTGCTTG 180
GCCTTACTTG CTTGGGCCCC TTCCCCCGCC GGGGTCTGCA CAAAGGCAGG AGCACCCTGC 240
GGGGCCCCAG GGTGCACGGG AAATACAGGG ATGACAGGGG AGTTGTGGGC CCCCGGGATG 300
GCACAAGGAG GGGTCCGTTC GCTGTGTGCC TGGGGAGGGG TGCACAGCCA CCCCCTCTCA 360
TGCCGGCGGT CTCGCCGCTT CCGCATCTGC TTGGCGGCCC CCTCTGCGTC TGGCTGTCTC 420
CCCATCACTT GCGTCTCTCT ACCCCCCTTT GTTCTCGGTT CCCCACACCT CCTCCTCACC 480
TGGTATTTAA ATCGCCTCCA GGCCGGGGAG CCACCCCCCG CTCCCCCGTC CCCTGGCGGG 540
CCTCTGGGGA CACGCAATGT CCATCCCCAG CGGAGGGGCC CCAGTGGGGG AGGGGCGGAG 600
GGGGAGGGTC TCCTTTGTTT GAGCAGCGGG CCTGCGCTGG CGAGGGAGGA GGGGGAGCCT 660
GGGTCGGCAG AGCCCCCGAA GGCCTCTCAA AGAGGGCCGG AGCCCCGCGG CGCCCACAAA 720
GACGAGCCCG GGCAAGAATT GGAGAGTTGT AGGCAGGAGC TGGCCTGAAG AGAGGCGCGG 780
GGGAGGGTGG CAAAGAGCCC ACGGGGGTTC AGGTGATAGC AAAGTCTCTT GTCTTTTGCA 840
GATGGGTTAG TGCTTAGTGC TTTCACCTGG AGTTAAGTGT CAAGGCTTAG GGGGCTCCCA 900
GGCCAGTAGG CCTCCCCACA GGCACTTGGG CCTGGAGAGC TGAGGGGTGG AAAACGCTCC 960
TCTGTCCTCC CCTCTCCTTG GGCAGGCACA GCCCTCCTCC TCCTCCTCCT CAGCCTCCGC 1020
TTCCGCGTCT CTGTGTTGTC TCCCGTCTCA CCCTCTTCCT TCCTACCCCC 1070