EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-01887

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr1:183947490-183949660

Target genes

Number: 6
Name	Ensembl ID

5S	ENSMUSG00000089429
Lbr	ENSMUSG00000004880
Enah	ENSMUSG00000022995
Srp9	ENSMUSG00000026511
Degs1	ENSMUSG00000038633
Fbxo28	ENSMUSG00000047539

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BHLHE22	MA0818.1	chr1:183948869-183948879	ACCATATGTT	+	6.02
BHLHE23	MA0817.1	chr1:183948868-183948880	CACCATATGTTT	-	6.27
FOXA1	MA0148.4	chr1:183948320-183948336	GCTTAAGTAAACACAG	+	6.54
FOXD2	MA0847.2	chr1:183948321-183948334	CTTAAGTAAACAC	+	6.25
HNF1B	MA0153.2	chr1:183948546-183948559	ATTAATCTTTAAC	-	6.07
OLIG3	MA0827.1	chr1:183948869-183948879	ACCATATGTT	+	6.02
Twist2	MA0633.1	chr1:183948869-183948879	ACCATATGTT	+	6.02
ZNF263	MA0528.1	chr1:183949159-183949180	TTCACCTTTCCCCGCTCCTCC	-	6.51
ZNF263	MA0528.1	chr1:183948602-183948623	GAGGGAGGAAGAAACGGAGGA	+	6.9

Enhancer Sequence

CCTACAGCAT CTGAGGTTAC CTCAGACCAA ACCACCCTAC CCTCACCCTC TTAGGAACTG 60
CTCAAGAGCG ACTCTACAAA GCCCTTCAAA GTGAAAAACT AGCTGATCCT CTTTTCTGCT 120
CTTAAATTAT TCAAAATCAG CCTACAAAGA ATTACTGTAG ACTGCGCAAA CTCCTCAGAC 180
CTGGGGGGAA TGTTCTGTAT TTACACCACT GGGAAAACGT CAGTGTGATT TCTCTATCTC 240
TACAGCTAGT AAGAAATATG GCAAGAAAAC AGCTTTCAAA GCATTAGTTA TATTTCGCTA 300
GAAGCTAGAA CTTCTAAGTC CAGACATAAC TTACTGAGAC AGTGTATGAT TTAAGTTTTA 360
CTAAATACTT CAAACTTGAA TATATTTTGT TCACAAGCTT TCAAATAGCT TTGATCAAAT 420
GTTAAAATAC CCTGCTTTAT TTTGTCCTTT TAATGTTTTA AGAAAATTAT TGCAAGTCTG 480
AAAAAAAAAA ACCAAAAAAC TACTAACTAC TAACTTGTTG GGCAAGACCT ATATAGCATT 540
ATGTCACTAA AGTACAATCA ACAGTATGTA ATATTACCTG ACAGAACAGT CATGTTTTTT 600
AACAGTTCCT GAATTTTCAA GGCCACCAGT AGCTTAGCAA AAATGCACAA AAATATAACA 660
GGTTTCTCAA CTTGCATTTT ACAAAGATTA ATCTTGATTT CTATGCCATT AATTACTTTT 720
TAAACATTTG AAATAAGTTG TATGAAATCA CCCAGGAAAA GGGGTCACTT GGCAAAAATC 780
TAACACTAAC ATAAAGATCT GTCACCCAGA ATCAGAAAAA TTCATAGTAA GCTTAAGTAA 840
ACACAGCACA AAAATATACT TAAAATTGTA ACGGGTCTGT GTTCAACCCT GATTTTTTTT 900
TTTTTTTTTG AGGAGGGGGA TATAAAAGCT AAAGTTTCAA ACAGAAATAA GGGGGGAAAT 960
TCCAATGACA AGATTTTCAG GCCAAAGAGA AGGAATTTGA AGATATTATT CAAATCTCAT 1020
TTCATTACAT TATAAAGGTC TTGGCAACCG TCGGCCATTA ATCTTTAACA CAAAGGAGAT 1080
TCAAATCCAA ATGAACTGAA AGACTATCTC GGGAGGGAGG AAGAAACGGA GGAATTTACT 1140
TCATCCACAA TTGTTTAACC TAAAAGGGAG GCCTTTAAGG ATGAGTACGC AAAATGCATC 1200
AGCCTTCAGT CTACGAGGTC CTATTTCTCA CTAAGTCTTG CACCAATCCA AAAGCGGGAG 1260
GTTATGGACA CAAAACAACC TTAGGAAAGG CTTGGGGTGG GTGGTCGCCA ATGAGTGACA 1320
CACCACATCA TGGTTTATTC TCCTACACAA CTGGAGAGAC AAAAATTAAA AAACATCACA 1380
CCATATGTTT CACCGTATCA ATCAAAAAGC ATTTCACCAC GGTACATCCA AGACTTTCCT 1440
TTGGGGCTGA AAAATAAATA AATAATTGTA TTGATTACAG AGGAAGGGAA ACGCGGCCGC 1500
TTCTGCTGCA ATGCAACACA GGCTGCTACG AACCGGAGAG AAGGGCTTTC CAAACAAAAC 1560
CCTCCCCCGC CCGGGCTTAC AAACCTCAAC CAACTTATCC CAGCCTCACA CTGTCCCCCG 1620
CCAGAGGAAA CCTAGTAAAT GCTCTCCCTT CCCCCACCAT CGAGAAATGT TCACCTTTCC 1680
CCGCTCCTCC GCTTTACCCC TACCAGAGGC ACTTTATTCC CCGCAGAGAT TTCAAACCTT 1740
CCAAACTTTC CTCCCCACCC CCCTTTTAAT TAAACACTAG AGCTTTGTAC TAAAAGTGCA 1800
GAGAATTTTT ACAGATGTAC GGAAAATACC TGTTTCTCGG CAACGAGCAC GCTACGACTA 1860
CCGAGCCCCT CCCCATCTCC TGGGTTTCGT TAACCCAGGC TGGGGGAGGG AGGGAGGGAG 1920
CTGGCATATT GAATTGAGGA AGGGAAATCC TGGGTAAAAG AAGAGCATCG GAGGGGGACA 1980
CCGGGAGGAG CCCCCTCCCC CAAATCAGAG CGGCTGGGCA GGGCAGCTGG ACCGGAGAAA 2040
CCCGAAGGGA CAAAAGGGAG CGAGAAAGAG CCGGGAGAGC CGAGCCGGCG CCGCGGGCCG 2100
GGGCAGGCGG GTCCGCGCAG AGCGGTCGCG GCGCCGCGGC ACAATGGCTG GCGGCCCGCG 2160
CGCCCCTCAC 2170