EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-01539

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr1:158718320-158721170

Target genes

Number: 5
Name	Ensembl ID

Tor3a	ENSMUSG00000060519
Fam20b	ENSMUSG00000033557
Gm15428	ENSMUSG00000046057
Angptl1	ENSMUSG00000033544
Ralgps2	ENSMUSG00000026594

TF binding sites/motifs

Number: 14

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXD2	MA0847.2	chr1:158719146-158719159	GCTAAATAAACAT	+	6
Foxa2	MA0047.2	chr1:158720514-158720526	CCAAAGTAAACA	-	6.74
KLF14	MA0740.1	chr1:158719282-158719296	AGCCACGCCCACTC	+	6.51
NR2C2	MA0504.1	chr1:158719488-158719503	AGGGGTCAGAGATCA	+	6.31
NR3C1	MA0113.3	chr1:158719078-158719095	AAGAACACAGTGTCCCA	-	6.23
NR3C1	MA0113.3	chr1:158719078-158719095	AAGAACACAGTGTCCCA	+	6.51
NR3C2	MA0727.1	chr1:158719078-158719095	AAGAACACAGTGTCCCA	-	6.38
NR3C2	MA0727.1	chr1:158719078-158719095	AAGAACACAGTGTCCCA	+	6.39
RARA(var.2)	MA0730.1	chr1:158720436-158720453	TGACCCCTCACTGACCC	-	6.05
SP1	MA0079.4	chr1:158719280-158719295	TCAGCCACGCCCACT	+	6.43
SP2	MA0516.2	chr1:158719279-158719296	CTCAGCCACGCCCACTC	+	6.03
SP3	MA0746.2	chr1:158719282-158719295	AGCCACGCCCACT	+	6.54
SP4	MA0685.1	chr1:158719280-158719297	TCAGCCACGCCCACTCC	+	6.8
SP8	MA0747.1	chr1:158719283-158719295	GCCACGCCCACT	+	7.22

Enhancer Sequence

AGAGGGCATC AGATCCCATT ACAGATGGTT GTGAGCCACC ATGTGGTTGC TTGGAATTGA 60
ACTCAGGACC TCTAGAAGAA CAGTCAGCAC TCTTGACCGT TAAGCCATCT CTCCAGCCCC 120
GAGTAACAAT TCTTGAATTA CAAGAGGAAA GAATACCTTC AGAACGCCAT TGGAAGGAAT 180
AATGGAAATA CCGTGCCTAA GATGAATAAG ATTAGATCCA GGGCCAGCCT CAGTGACTAT 240
ACTGAGTTAA ACTGGTCACC TTCACCACGG TGAGTTTGAG CAGAGGATGG ATCTGAGCTG 300
TGGAGCTGGG AAGGCAGTCC CGAGGACAGC CCAGGTCCTG CTGTTTGTGC AACCCACCAG 360
TCTGCTGTAA AACCTGGCTT TCAGCTTTCA GGACAGTCTC AGGTTGCTCA CCTGATAACC 420
ATGAGATCCA CACGGGACCC TGAGTTGTCT CAACAAGGAG TTTGATTTGA GTTAATCAAG 480
AAAAGCCCAG CTGTGTCTTG GTGGCTGCAT CTCCCGACAG CCAGGACACT CTTAGTGGTT 540
AAACAGCCTT GAGGCTGTAG ATCACTTGTC CCTGCTCTGG GTATTTTGCC GTATATGTAC 600
ACTAAGGCTA TGTGGCCCTT TCTAGGGGAT CATGGGAAGG GATTCTCTAC AAGTGAATCT 660
AGTCTACCAT GACTTAAAAG GGGAGAAAGT CACTTTACCC CATGAATATG ATATCCAGCT 720
CATTAAAATT TATCAAAGTT CCTTTAAAAC CCACAACAAA GAACACAGTG TCCCACCCTG 780
TGTCATAGCC CACTCCAACT TCTGTTCGGA GAGCTTGCTT TGTTCTGCTA AATAAACATC 840
TATTTAAACT GTGTGGCTCT CTACTGAATT CTTTCTACCT TATCCTATCT TTCAAACTCT 900
CTTGTTCTTT CCCTATTTTT TCACTATGCC AATCTCAGGC ACTGGGCACT TACTAGGAGC 960
TCAGCCACGC CCACTCCCTG GCTTGCTGCT TCTTGGCCCC AAGACTGTTA AGGCTCTAAC 1020
TTCAAATTCC CCAGATCTGC TATAGGGCCA GAATTCAGCA CATTGTGTGT GTGTGTATGT 1080
GTGCACATGC ACGTGCATAT GTGTGTGTGT GTGTGTGTGT GTATGTGCTC GTTCACATGA 1140
ATGTATGTGC ATCCTCCTGT GTGAGTGTAG GGGTCAGAGA TCAGGTTCAC GTGTCTTCAT 1200
ACGCTTGTTT CTGTCTGCTC CCAGCGCTGG AGTTTCAGAC TCACATTATC AATCAACTGC 1260
GTTTTTTTTC TCTCGAGTGG GTGTTGGTGA TTCAAACTCA GGCCCTCACA CTTGTGCATC 1320
AAGCACTTTA CCCACAGAGC CATCGTCCCA GCCTCCACAT CTTAGTTTTT ATTAGACATT 1380
CTAAGTGTAT GCTTCCTAAG AATAAAAGAT GCAGGCTTCT TTTTAGAATA GCAGTTCTCA 1440
ACTTGTGGGT TGAGACCCCT TCGGGGGTTG AATAACCCTT TCACAAGGGT GACATATCAG 1500
ATACCCCACA CACCAGATAT CCAGCCTATC AGACATTTAT ATTACAGTTA ATAACAGGAG 1560
CAAAATTACA GTTATGAAGT AGCAGTGAAA TAATTTTATG GTTGAGAGTC ACTACCACAT 1620
GGGGAACTGT ATTAAAGGGT TACGTCATTA GGAAGGTGGA GAACTACTGA TATAGATGGA 1680
TGTTCTAACC AGCAAATGGA TAATTAAGAT GTTGCAAAGA AGTCCTTGGC AGTGGGGTGA 1740
GGGGCTGCTT TATGTCAGTC CTACAGGGAT GCTCAGGGGT CACAGTTTTT AACAGCGATT 1800
ACATAGCTCA TTGTCTAGCT GGAAGGACGA GTACAAAGGA GAGCTCCATT TCTTAGCAGG 1860
CCTGGCTTTG TTTGGTAACT ATTTACTGGA TACCCTGGTA GCACGCTGCC CTAGTGTGCT 1920
GTGGGAGAGG GACCACTCAG CCTGGAACAG AGAATGTAAA TACTTGGTGG GAAAAGCATA 1980
ATTATTTTAA GGCACTTCAA AACAAAAGCG AAGAGGGAAA CAGTCTGGTT TTAACCGTTT 2040
GGGAGAATCC AGCTTAAGAA CAAGCTGAGC TGTTAACAAA TGAGCATAGG GGCTGGCTGT 2100
TGCCCTGGGG TTCTTGTGAC CCCTCACTGA CCCTTAGAGG CAGCATCCTG ATCTCTCAAA 2160
TGACTCAGAA ACCAGCAGGG CCTGGTCTGA CTTACCAAAG TAAACACCAA GTTCCCTTTC 2220
TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TTTCTCTCTC TCTCTCTCTC TCTCTGTTAA 2280
AGATTTATTT ATTATATGTA AGTACACTGT AGCTGTCTTC AGCCACACCA GAAGAAGGCA 2340
TCAGAACTCA TTACGGATGG TTGTGAGCCA CCATGTGGTT GATAGGATTT GAACTCAGGA 2400
CCTCTGGAAG AGTAGTCAGT GCTCTTAACC ACTAAGCCAT CTCTCCAGCC CTCCAAGTTC 2460
CTTTTCTAGC TGAATCTCCA CAGACAGGCC CTGGGGAAGG GCTCCCTAGA CCCCTCCAGG 2520
GGCAAAGGAG ACAGCCAGGC TAGGCTGTCT ATTCTAGTGT ATCTGTTTAG TTTGGGAAAT 2580
TCTACTCTCA TATTCTGCAA AGATCCCATT TTTTTCTTCT TCAGAAATAT TTCTGTTTTA 2640
TTCATTTATG TGTGGTATGC ACACCATGGT ACACATGCAG GGGCCAGAAG ACAACATGTG 2700
GCAGGCAGTC CTCTCCTCCC ATGAGGGGCT CAGGCTGTCA GGGTTGGTAG CAAGCACATG 2760
TACTTGCTGA GTTATTGCCA ATCTTCTTAT CTATCCACAC ATGCATCCAA GTGTCTGTCT 2820
ATCTATCTAT CTATCTATCT ATCTATCTAT 2850