EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-01003

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr1:99744930-99746680

Target genes

Number: 7
Name	Ensembl ID

D1Ertd622e	ENSMUSG00000044768
Gin1	ENSMUSG00000026333
Ppip5k2	ENSMUSG00000040648
7SK	ENSMUSG00000089169
Gm3531	ENSMUSG00000089782
B230216N24Rik	ENSMUSG00000089706
Pam	ENSMUSG00000026335

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PBX1	MA0070.1	chr1:99745886-99745898	CCATCAATCAAA	+	7.22
POU6F1	MA0628.1	chr1:99744980-99744990	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr1:99744980-99744990	ATTAATTAAT	-	6.02
RFX5	MA0510.2	chr1:99745526-99745542	CGTTGCTATAGCAAAC	+	6.03
RREB1	MA0073.1	chr1:99745404-99745424	CCCCCCACCACCACCACACA	+	7.85

Enhancer Sequence

CTACAGTTGT GCTGTAGCCA AGAAGTCTCA GTGAGTATGT ATGTTCTTGA ATTAATTAAT 60
GAGGGAATCT CTTTATGTGC CCACCCACAA ACAAAGAAAA AGGGAGTCCA AAGGAAAGAA 120
AACAAAATTC AAATATTAGA GAAGCTACTT ATATTAATAT CACTTAATTA TAGCTATTTA 180
CCTTTAGTTA TGGGAGTGAA AAATAAGGGA AGTAAAAAGT TCTTAGGAGA CAATGTAGCG 240
TCAAAGGCAT TAACCACAAT TCCGTGGGCC TGACCCTTCC ATTTAACATC CCTTAGCAGA 300
TGTCGGTACG TTTAACCTGG CAGCACCAAG AGACATTCGG TTACTCAAAT GATTGGTTGT 360
CTTTCCTAAT CCTTCCGCTT GGGATGTCAT GAGACTAACA GCTGCTCTCG GGTGTTACAC 420
AGGGCAAATA ATAAAGGCAC AGGCTCTGTT TCTGAAATGA GAAAACTGCA CAACCCCCCC 480
ACCACCACCA CACACACATA GCCAAACAAA ATAGTTTATA AACTCTTTTG TAACTTAAAA 540
AAAGGTAACC CTTGAACAGC TCACAAATGG ATGTCAGATT ATAGAGCTAG CTATATCGTT 600
GCTATAGCAA ACTGATTATT TAGTGTTTTA AAGCCGCTAC CCCCCACTTC TGTGCTGCAC 660
AGAAGTCTTT ATTTCAACCA CATTTAACTT TTCACGGGGC ATAATAATGC CCTGCACATT 720
TCACACAGTG CCCGGAGCAC TGACGGATTC TGTATGCTTC TCTGAAAAAG CACGCAGTTG 780
CAAAGACTGA GCCTATGGGC GGGAATTCAG TTCTTTATTT TAACAGTGTG AATTCCCCAT 840
TAATGATTTT GCACATTAGC AGCTAATCAA ACAGTTTAGA TAAGCCCGAG AAGAAATACT 900
TTTCCATATT CACACACAGA CAAAGTGCCA GAAGAAGTAC AAAATAAACT TAGGCGCCAT 960
CAATCAAAAT TAAGGGAATG CAAAATAAGT AATAACATGA AGAAAGAAGC AGCACGCTGT 1020
GGTAATTATA TAAATTAAGA AACTGGGAGA AGAACCATAA GTTTTCAATT GAACAAATAA 1080
ATAAAAATGT GCCTTTACTG CTAGGGGAGC AGCTTATAAG GCCCTTTACA GTGGGAGTGT 1140
GTTTCAAATA GTATGTTAAA AACACTCTGG ATGCACTCTT GGTTTGGAAA ACCCCCATGA 1200
TAAGGAAAAA AGGAAGACAA AGAAACCAGT GTAACCATTT GGTATTCTGA CTGGCCTAGA 1260
CCTGGGGCCC CCAATAAGCA GTTAAGAGAA TATGGAACCA GATATTAAGA GCCCAGGGCT 1320
GTAGATCTTG TTCAGTCAAT ATTACTACTG GGCACAAATG ATGTAACCAA ATGCATATTG 1380
TTATTAGGCA ACATTAGGCA ATTATTAAAA CTCCCACTTT GTTTTGGGCA AGGCACTGAT 1440
ACGCCAGCAG GTCAAATCTC TTGATAGGTA TCTCAAAGCT ACGAAGCAGG CACCAAGTCA 1500
AAGTCACTGT CACCGGTCTC TGTAAACATG GTTGCCTTTC TTTGAGTCTG ACTTCATTAG 1560
GCTGGACAGT TTCCATGATT CCAAATACTA CACAGGTGTA AAGAAGGGAG AATAGTGACC 1620
CGATGATGCA GAAGGAGTGA CATGAATGTG GAAGAAGAGG GCTTTTGGGA TCTGCGTGAC 1680
TGTAATATGG CAGAAAGGAG GAGAATATGG AAACATTCCT TTCCTAGAAC TTACCTTTCT 1740
CTCAGATGCA 1750