EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-00641

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr1:74363500-74364290

Target genes

Number: 12
Name	Ensembl ID

Tns1	ENSMUSG00000055322
Rufy4	ENSMUSG00000061815
Arpc2	ENSMUSG00000006304
Aamp	ENSMUSG00000006299
Pnkd	ENSMUSG00000026179
Tmbim1	ENSMUSG00000006301
Slc11a1	ENSMUSG00000026177
Ctdsp1	ENSMUSG00000026176
Vil1	ENSMUSG00000026175
Rqcd1	ENSMUSG00000026174
Usp37	ENSMUSG00000033364
Stk36	ENSMUSG00000033276

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SOX10	MA0442.2	chr1:74363658-74363669	AAAACAAAGCA	+	6.02
TCF3	MA0522.2	chr1:74364223-74364233	AGCAGGTGTT	-	6.02
ZNF263	MA0528.1	chr1:74364251-74364272	AGAGGAAGTGGGGAGGGGGGA	+	6.16
ZNF263	MA0528.1	chr1:74364233-74364254	AGGGGATGGGGGAGGGGGAGA	+	6.28
ZNF263	MA0528.1	chr1:74364240-74364261	GGGGGAGGGGGAGAGGAAGTG	+	6.41

Enhancer Sequence

ATATCAAGTA CAGCCTGGTG TGGTGGCACA CGCCTTTAAT CCCAGCACTT GGGAGGCAGA 60
GGCAGGTGGA TTTCTGAGTT CGAGGCCAGC CTGTTCTACA CAGTGAGTTC CAGGACAGCC 120
AGAGCTATAC AGAGAAACCC TGTCTCAAAA AACAAAACAA AACAAAGCAA AAACAAAAAC 180
AAAAACAAAC AAAAAAAAGA AGAATATCAA GTACTTTTAA CCCCTGAGCC ATCTATCTCT 240
TCAAGCCCCT TGGTGTTCTT ATTTTGAAAC AGGGACTCAT GTAATCCAAG CTGGCCTCAA 300
AGTTATTATG TTGCTGAGGG TGACTCTTGA ACCCAGTATG TTAGAGGGTC AGAGGCAAGG 360
TGACTGATCA AGGTTAGGAA GCAGCATTTC AGATGGTGTT GAAGAACTTG TGCAGGTTTG 420
GCTCCCAGCT ACCCATATGG TGGCTCAGCT GTCAGCATAG TGTGATTGCA AAGGCCAGAT 480
TTCAGGTCCA GTAAAACAAG AGCTGAGTTC ATACTCTACT TACCGGCTCT GTGATGGAGC 540
AAGTCATTTA GCTCATCTGA GCTTCAGCCT GCCCATCTCT ACAAAAGAGG ATGCAATAGT 600
TGTCCCTACA GCATTGCCAT GGTGATGAAT GACAAGTGTC TCATGCAGGT CTTCTGTTTA 660
GCAGAGTCTA AACTCTTGTT TTCCCTTTCC CACAACTGAA CATTTATTAC ACTCCAACTG 720
CCCAGCAGGT GTTAGGGGAT GGGGGAGGGG GAGAGGAAGT GGGGAGGGGG GAAGTGTGTT 780
GGGTACCAGG 790